Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS16750 and PFLU_RS16755 are separated by 97 nucleotidesPFLU_RS16755 and PFLU_RS16760 are separated by 71 nucleotidesPFLU_RS16760 and PFLU_RS16765 are separated by 110 nucleotidesPFLU_RS16765 and PFLU_RS16770 are separated by 37 nucleotides PFLU_RS16750: PFLU_RS16750 - sorbosone dehydrogenase family protein, at 3,800,317 to 3,801,609 _RS16750 PFLU_RS16755: PFLU_RS16755 - LysR family transcriptional regulator, at 3,801,707 to 3,802,648 _RS16755 PFLU_RS16760: PFLU_RS16760 - DMT family transporter, at 3,802,720 to 3,803,715 _RS16760 PFLU_RS16765: PFLU_RS16765 - GNAT family N-acetyltransferase, at 3,803,826 to 3,804,746 _RS16765 PFLU_RS16770: PFLU_RS16770 - MFS transporter, at 3,804,784 to 3,806,187 _RS16770
Group Condition PFLU_RS16750 PFLU_RS16755 PFLU_RS16760 PFLU_RS16765 PFLU_RS16770
carbon source D-Glucuronic 10 mM (C) -0.0 -0.2 -0.1 -0.6 -3.7
carbon source D-Glucuronic 10 mM (C) +0.0 -0.3 +0.2 -0.3 -3.5
carbon source D-Glucuronic 10 mM (C) -0.1 +0.0 +0.2 -0.5 -3.2
carbon source D-Glucuronic (C) +0.2 -0.6 -0.1 -0.2 -2.7
carbon source D-Glucuronic (C) -0.1 -0.3 -0.1 -0.2 -1.9
carbon source D-Glucuronic (C) +0.2 -0.5 +0.2 +0.0 -2.5
carbon source D,L-Malic Acid (C) -0.6 -1.2 -0.3 -0.3 -0.1
carbon source D-Galacturonic Acid (C) 5 mM -0.1 -0.2 +0.2 +0.1 -2.3
no stress control L-Glutamine (C)(N); with TAPS -0.6 -0.9 -0.2 -0.6 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.0 -1.5 +0.0 -0.2 +0.0
no stress control Glycine betaine (C)(N); with TAPS -0.4 +0.4 -0.5 -0.0 -0.8
no stress control L-Glutamine (C)(N); with MOPS -0.2 -0.9 -0.5 +0.1 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.6 -1.1 +0.3 -0.0 +0.2
carbon source L-Carnitine (C) +0.3 -1.0 +0.0 -0.4 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.7 -0.7 +0.4 -0.1 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 -0.9 -0.1 -0.2 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.4 +0.1 -0.8 -0.4 +0.2
carbon source p-Coumaric 2 mM (C) -0.2 -0.5 -0.4 +0.6 +0.2
carbon source Xanthosine (C) -1.0 +0.2 +0.1 +0.3 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.7 -0.3 +0.4 -0.4 -0.0
carbon source p-Coumaric (C) 5 mM -0.7 +0.6 +0.2 +0.3 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.7 +0.4 +1.0 +0.1 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.5 +0.7 +0.1 -0.4 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 +0.5 +0.1 -0.7 +0.2
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.2 +0.5 -0.4 +0.4 +0.4
carbon source caffeic 2 mM (C) -0.3 +1.0 +0.5 +0.1 +0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 +0.2 +0.4 -0.1 +0.4
stress Betaine (C)(N); with MOPS; with chloride +0.9 +0.4 -0.3 +0.1 +0.6
nitrogen source nitrate (N); with MOPS +0.3 +0.3 +0.7 +0.6 -0.1
pH Growth at pH8 and (C) Trisodium citrate +0.4 +0.6 +0.7 -0.1 +0.2
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