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Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16090 and PFLU_RS16095 are separated by 308 nucleotides
PFLU_RS16095 and PFLU_RS16100 overlap by 23 nucleotides
PFLU_RS16100 and PFLU_RS16105 are separated by 81 nucleotides
PFLU_RS16105 and PFLU_RS16110 are separated by 89 nucleotides
PFLU_RS16090: PFLU_RS16090 - OprD family porin, at 3,654,972 to 3,656,297
_RS16090
PFLU_RS16095: PFLU_RS16095 - 3-(3-hydroxy-phenyl)propionate transporter MhpT, at 3,656,606 to 3,657,814
_RS16095
PFLU_RS16100: PFLU_RS16100 - hypothetical protein, at 3,657,792 to 3,658,739
_RS16100
PFLU_RS16105: PFLU_RS16105 - SDR family oxidoreductase, at 3,658,821 to 3,659,588
_RS16105
PFLU_RS16110: PFLU_RS16110 - benzaldehyde dehydrogenase, at 3,659,678 to 3,661,153
_RS16110
Group
Condition
PFLU
_RS16090
PFLU
_RS16095
PFLU
_RS16100
PFLU
_RS16105
PFLU
_RS16110
carbon source
4-Acetoxy-3-methoxycinnamic 2 mM (C)
-3.8
-2.9
+0.1
-0.3
+0.4
carbon source
4-Acetoxy-3-methoxycinnamic 2 mM (C)
-3.6
-2.2
-0.2
-0.5
+0.3
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+4.4
+0.3
-0.4
-0.3
-1.2
carbon source
p-Coumaric (C) 5 mM
+7.0
-0.3
-0.1
-0.2
-1.4
carbon source
p-Coumaric (C) 5 mM
+6.6
-0.3
-0.3
-0.9
+0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+5.8
-0.1
+0.1
+0.1
-0.6
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+5.9
-0.0
-0.3
+0.6
-0.4
carbon source
p-Coumaric (C) 5 mM
+6.9
-0.3
+0.3
-0.8
-0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+5.8
-0.0
-0.1
+0.5
-0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+6.5
-0.1
-0.2
-0.3
+0.2
carbon source
p-Coumaric (C) 5 mM
+6.9
-0.1
+0.1
-0.4
-0.5
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+6.8
-0.1
+0.1
-0.3
-0.5
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+6.9
-0.0
+0.1
-0.1
-0.4
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+6.7
-0.2
+0.1
+0.1
-0.2
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
+8.3
-0.6
-0.3
-0.1
-0.2
carbon source
Ferulic Acid 2 mM (C)
+9.9
-0.7
-0.0
-0.6
+0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+8.3
+0.2
+0.2
-0.1
+0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+9.1
+0.2
-0.0
-0.2
-0.2
carbon source
Ferulic Acid 2 mM (C)
+9.1
-0.3
+0.1
-0.4
+0.4
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+8.4
+0.4
-0.0
-0.2
+0.3
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+8.8
+0.2
+0.3
-0.2
-0.1
no stress control
Ferulic (C) and Ammonium chloride (N); with MOPS
+9.5
-0.1
-0.0
-0.0
-0.3
carbon source
Ferulic Acid 2 mM (C)
+9.5
-0.3
-0.2
+0.2
+0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+11.7
-0.5
-0.1
-0.4
-0.6
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+9.5
+0.3
+0.3
+0.1
-0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+11.2
-0.6
-0.2
+0.8
+0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+11.6
-0.1
-0.1
+0.7
-0.2
carbon source
Ferulic Acid (C) 1.5 mM
+13.0
+0.1
-0.4
-0.2
-0.3
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+11.8
-0.2
-0.2
+0.2
+0.9
carbon source
Ferulic Acid (C) 1.5 mM
+13.0
-0.1
+0.0
+0.1
+0.1
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