Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS15700 and PFLU_RS15705 are separated by 46 nucleotidesPFLU_RS15705 and PFLU_RS15710 are separated by 54 nucleotidesPFLU_RS15710 and PFLU_RS15715 overlap by 4 nucleotidesPFLU_RS15715 and PFLU_RS15720 are separated by 0 nucleotides PFLU_RS15700: PFLU_RS15700 - non-ribosomal peptide synthetase, at 3,533,272 to 3,536,283 _RS15700 PFLU_RS15705: PFLU_RS15705 - non-ribosomal peptide synthetase, at 3,536,330 to 3,550,240 _RS15705 PFLU_RS15710: PFLU_RS15710 - non-ribosomal peptide synthetase, at 3,550,295 to 3,560,359 _RS15710 PFLU_RS15715: PFLU_RS15715 - non-ribosomal peptide synthetase, at 3,560,356 to 3,564,102 _RS15715 PFLU_RS15720: PFLU_RS15720 - cyclic peptide export ABC transporter, at 3,564,103 to 3,565,734 _RS15720
Group Condition PFLU_RS15700 PFLU_RS15705 PFLU_RS15710 PFLU_RS15715 PFLU_RS15720
stress Sucrose (C) and L-Glutamine (N); with TAPS; with PEG -0.0 -0.0 -0.0 -0.0 -1.4
stress Sucrose (C) and L-Glutamine (N); with TAPS; with PEG -0.0 -0.1 -0.1 -0.1 -1.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 +0.2 -0.0 -0.6 -0.7
no stress control Glycine betaine (C)(N); with TAPS -0.1 -0.0 -0.0 +0.1 -1.1
no stress control Sucrose (C) and Ammonium chloride (N); with TAPS -0.1 -0.0 +0.1 +0.1 -1.0
no stress control Glycine betaine (C)(N); with MOPS +0.3 +0.0 -0.4 -0.2 -0.5
stress L-Glutamine (C)(N); with MOPS; with chloride +0.2 +0.1 +0.0 -0.3 -0.8
no stress control Glucose (C) and L-Glutamine (N); with TAPS +0.1 +0.1 +0.2 -0.3 -0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 +0.1 +0.1 -0.3 -0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 -0.2 +0.3 -0.2 -0.1
carbon source D-Xylose (C) -0.0 -0.2 -0.2 +0.2 -0.4
no stress control Glucose (C) and nitrate (N); with TAPS +0.0 +0.1 +0.2 -0.0 -0.8
no stress control Glucose (C) and nitrate (N); with TAPS +0.1 +0.1 +0.1 +0.0 -0.8
carbon source Shikimic Acid (C) +0.1 +0.1 +0.0 +0.3 -0.9
carbon source Phloretic Acid 2 mM (C) +0.5 +0.1 +0.0 -0.1 -0.7
carbon source Inosine (C) -0.2 +0.1 +0.2 +0.3 -0.5
stress Betaine (C)(N); with TAPS; with chloride +0.1 +0.2 -0.1 +0.3 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +0.2 +0.2 -0.2 -0.3
carbon source acetate 30 mM (C) +0.3 +0.2 -0.0 +0.4 -0.6
stress Betaine (C)(N); with TAPS; with chloride +0.1 +0.1 +0.2 +0.3 -0.5
no stress control Glucose (C) and Ammonium chloride (N); with TAPS +0.5 +0.3 +0.2 +0.2 -0.8
carbon source caffeic 2 mM (C) -0.2 -0.1 -0.1 +0.1 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 +0.3 +0.1 +0.4 -0.2
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride +0.3 +0.2 +0.2 +0.2 -0.3
carbon source L-Valine 10 mM (C) +0.1 -0.2 -0.1 +0.2 +0.6
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.4 +0.2 +0.3 +0.0 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 +0.2 +0.3 +0.1 -0.2
carbon source L-Valine (C) -0.1 -0.1 +0.2 +0.4 +0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.3 +0.3 +0.3 +0.1 +0.1
carbon source NAG (C) +0.1 +0.1 +0.1 -0.0 +0.9
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