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Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS15605 and PFLU_RS15610 are separated by 153 nucleotides
PFLU_RS15610 and PFLU_RS15615 are separated by 276 nucleotides
PFLU_RS15615 and PFLU_RS15620 are separated by 568 nucleotides
PFLU_RS15620 and PFLU_RS15625 are separated by 83 nucleotides
PFLU_RS15605: PFLU_RS15605 - DMT family transporter, at 3,506,243 to 3,507,136
_RS15605
PFLU_RS15610: PFLU_RS15610 - helix-turn-helix transcriptional regulator, at 3,507,290 to 3,507,871
_RS15610
PFLU_RS15615: PFLU_RS15615 - helix-turn-helix domain-containing protein, at 3,508,148 to 3,509,083
_RS15615
PFLU_RS15620: PFLU_RS15620 - phenylacetaldoxime dehydratase family protein, at 3,509,652 to 3,510,710
_RS15620
PFLU_RS15625: PFLU_RS15625 - transporter, at 3,510,794 to 3,511,660
_RS15625
Group
Condition
PFLU
_RS15605
PFLU
_RS15610
PFLU
_RS15615
PFLU
_RS15620
PFLU
_RS15625
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-2.2
-1.6
-0.7
-0.0
-0.3
no stress control
4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS
-2.6
-1.1
-0.5
-0.6
-0.1
stress
malate (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-0.0
-1.6
-2.8
+0.1
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-1.6
-1.0
-2.2
+0.4
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.4
-0.8
-0.8
-2.7
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-0.1
-0.8
-1.1
-2.7
+0.4
carbon source
NAG (C)
-0.3
-2.1
-1.4
-0.2
-0.3
stress
Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-1.2
-0.7
-2.4
+0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.0
-1.7
-0.5
-0.6
-1.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-0.5
-2.2
-0.8
-0.4
-0.2
stress
Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.1
-0.5
-1.1
-2.7
+0.2
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-0.1
-0.7
-1.0
-2.6
+0.3
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-0.2
-0.8
-1.0
-2.3
+0.4
stress
malate (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-0.4
-1.3
-2.4
+0.5
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride
-1.0
-2.3
-0.5
+0.0
-0.2
no stress control
Glucose (C) and nitrate (N); with TAPS
-0.5
-2.2
-0.5
-0.4
-0.3
stress
malate (C) and Ammonium chloride (N); with MOPS; with PEG
-0.1
-0.7
-1.2
-2.0
+0.2
stress
Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.1
-0.9
-0.7
-2.2
+0.2
stress
malate (C) and Ammonium chloride (N); with MOPS; with PEG
-0.1
-0.9
-1.2
-1.8
+0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.3
-1.3
-0.7
-1.9
+0.4
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride
-0.9
-1.6
-0.3
-1.0
+0.1
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.3
-0.1
-1.3
-2.3
+0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-0.7
-1.1
-1.9
+0.4
stress
malate (C) and Ammonium chloride (N); with TAPS; with PEG
-0.2
-0.6
-0.5
-2.4
+0.2
stress
Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG
-0.2
-0.2
-0.6
-2.7
+0.3
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
-0.2
-0.6
-1.2
-1.7
+0.4
stress
Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG
-0.1
-0.6
-0.8
-2.2
+0.3
stress
malate (C) and Ammonium chloride (N); with MOPS; with PEG
-0.1
-1.0
-1.0
-1.4
+0.3
stress
Sucrose (C) and Ammonium chloride (N); with TAPS; with PEG
-0.1
-0.0
-1.1
-2.4
+0.5
stress
Sucrose (C) and L-Glutamine (N); with TAPS; with PEG
+0.0
-0.7
-0.8
-2.0
+0.4
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