Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS15590 and PFLU_RS15595 overlap by 1 nucleotidesPFLU_RS15595 and PFLU_RS15600 are separated by 46 nucleotidesPFLU_RS15600 and PFLU_RS15605 are separated by 56 nucleotidesPFLU_RS15605 and PFLU_RS15610 are separated by 153 nucleotides PFLU_RS15590: PFLU_RS15590 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 3,503,664 to 3,504,881 _RS15590 PFLU_RS15595: PFLU_RS15595 - acyl carrier protein, at 3,504,881 to 3,505,111 _RS15595 PFLU_RS15600: PFLU_RS15600 - ketoacyl-ACP synthase III, at 3,505,158 to 3,506,186 _RS15600 PFLU_RS15605: PFLU_RS15605 - DMT family transporter, at 3,506,243 to 3,507,136 _RS15605 PFLU_RS15610: PFLU_RS15610 - helix-turn-helix transcriptional regulator, at 3,507,290 to 3,507,871 _RS15610
Group Condition PFLU_RS15590 PFLU_RS15595 PFLU_RS15600 PFLU_RS15605 PFLU_RS15610
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.3 N.D. -1.0 -2.2 -1.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 N.D. -1.4 -1.0 -2.3
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.8 N.D. +0.1 -2.6 -1.1
carbon source Xanthosine (C) -0.2 N.D. -2.6 -0.2 -0.9
carbon source propionate 20 mM (C) -0.8 N.D. -0.4 -0.4 -2.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.1 N.D. -0.7 -0.6 -1.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 N.D. -0.8 -0.5 -2.2
carbon and nitrogen source NAG carbon and (N) +0.2 N.D. -0.9 -0.3 -2.7
no stress control Glucose (C) and nitrate (N); with TAPS -0.6 N.D. -0.5 -0.5 -2.2
stress Betaine (C)(N); with TAPS; with chloride -1.4 N.D. -1.3 -0.0 -1.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 N.D. -0.4 -0.3 -2.9
carbon source L-tyrosine 10 mM (C) -0.2 N.D. -0.8 -0.7 -1.9
carbon source propionate 20 mM (C) -0.5 N.D. -0.1 -1.2 -1.6
carbon and nitrogen source NAG carbon and (N) +0.3 N.D. -1.0 +0.0 -2.5
carbon source L-Carnitine (C) -0.3 N.D. -2.2 +0.3 -0.9
carbon source acetate (C) +0.2 N.D. -0.5 -0.3 -2.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 N.D. +0.5 -0.6 -2.0
carbon source NAG (C) +0.5 N.D. -0.5 -0.3 -2.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.6 N.D. +0.1 -1.7 -1.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.8 N.D. +0.9 -0.3 -1.9
stress malate (C) and Ammonium chloride (N); with TAPS +0.6 N.D. +0.4 -0.2 -2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.0 N.D. +0.1 -0.9 -1.4
carbon source D-Fructose (C) +0.8 N.D. +0.6 -0.1 -2.3
carbon source Cytidine (C) +1.0 N.D. +1.1 -0.7 -2.0
carbon source pyruvate (C) +0.9 N.D. +0.9 -1.0 -1.1
carbon source pyruvate (C) +1.5 N.D. +1.5 -1.1 -1.5
carbon source pyruvate (C) +1.7 N.D. +0.8 -0.9 -1.2
carbon source 4-Guanidinobutyric (C) +1.1 N.D. +1.4 -0.4 -1.5
carbon source Cytidine (C) +1.2 N.D. +1.5 -0.4 -1.6
temperature shift Temperature shift 10_to_30 +1.1 N.D. +0.5 +0.7 -1.4
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