Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS15275 and PFLU_RS15280 are separated by 85 nucleotidesPFLU_RS15280 and PFLU_RS15285 are separated by 417 nucleotidesPFLU_RS15285 and PFLU_RS15290 are separated by 2 nucleotidesPFLU_RS15290 and PFLU_RS15295 overlap by 4 nucleotides PFLU_RS15275: PFLU_RS15275 - hypothetical protein, at 3,422,619 to 3,422,831 _RS15275 PFLU_RS15280: PFLU_RS15280 - hypothetical protein, at 3,422,917 to 3,423,465 _RS15280 PFLU_RS15285: PFLU_RS15285 - circularly permuted type 2 ATP-grasp protein, at 3,423,883 to 3,425,292 _RS15285 PFLU_RS15290: PFLU_RS15290 - alpha-E domain-containing protein, at 3,425,295 to 3,426,245 _RS15290 PFLU_RS15295: PFLU_RS15295 - alpha/beta hydrolase, at 3,426,242 to 3,427,183 _RS15295
Group Condition PFLU_RS15275 PFLU_RS15280 PFLU_RS15285 PFLU_RS15290 PFLU_RS15295
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.3 -1.2 +0.1 +0.2 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 -3.4 -0.1 -0.4 +0.1
carbon source L-Carnitine (C) -1.7 +0.0 -0.1 -0.5 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.7 +0.3 -0.1 -0.5 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -2.4 -0.1 +0.5 +0.3 -0.4
carbon source Shikimic Acid (C) -2.8 +0.2 -0.5 +0.3 +0.7
carbon source Phloretic Acid 2 mM (C) -2.0 +0.2 -0.2 +0.1 +0.0
carbon source L-Isoleucine (C) -0.9 -1.0 -0.1 -0.1 +0.5
no stress control Glycine betaine (C)(N); with MOPS +0.5 -1.1 -0.3 -0.1 -0.4
carbon source D,L-Malic Acid (C) +0.5 -0.8 +0.2 -0.8 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.7 +0.4 +0.3 +0.1 -0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 -0.6 +0.1 +0.4 +0.3
carbon source p-Coumaric 2 mM (C) -1.3 +0.6 +0.2 +0.4 -0.4
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -1.3 +1.3 -0.0 +0.1 -0.4
stress Betaine (C)(N); with MOPS; with chloride -1.4 +0.7 -0.1 -0.3 +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 +0.9 +0.3 -0.5 +0.3
pH Growth at pH9 and (C) Trisodium citrate -1.5 +0.7 -0.1 +0.2 +0.4
temperature Growth at 25C -1.1 +0.5 +0.2 +0.5 -0.2
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.6 -1.0 +0.1 -0.3 +0.7
stress Betaine (C)(N); with MOPS; with chloride +1.3 -0.6 +0.2 -0.2 -0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 -1.0 +0.4 +0.1 -0.1
carbon source Inosine (C) +1.1 -0.6 +0.3 -0.7 +0.1
stress Betaine (C)(N); with MOPS; with chloride +1.1 -0.8 +0.2 -0.2 +0.1
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.9 +0.7 +0.3 +0.1 +0.7
pH Growth at pH8 and (C) Trisodium citrate +0.7 -0.2 +0.2 -0.6 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.3 -0.3 -0.2 +0.2 +0.5
carbon source caffeic 2 mM (C) -0.3 +1.4 +0.2 +0.1 +0.4
carbon source Quinic Acid (C) +0.9 +1.0 +0.2 -0.6 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.9 +1.7 -0.1 -0.2 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.3 +0.6 +0.3 +0.0 +0.5
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