Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS15265 and PFLU_RS15270 are separated by 83 nucleotidesPFLU_RS15270 and PFLU_RS15275 are separated by 136 nucleotidesPFLU_RS15275 and PFLU_RS15280 are separated by 85 nucleotidesPFLU_RS15280 and PFLU_RS15285 are separated by 417 nucleotides PFLU_RS15265: PFLU_RS15265 - EAL domain-containing response regulator, at 3,419,817 to 3,421,046 _RS15265 PFLU_RS15270: PFLU_RS15270 - sodium:proton antiporter, at 3,421,130 to 3,422,482 _RS15270 PFLU_RS15275: PFLU_RS15275 - hypothetical protein, at 3,422,619 to 3,422,831 _RS15275 PFLU_RS15280: PFLU_RS15280 - hypothetical protein, at 3,422,917 to 3,423,465 _RS15280 PFLU_RS15285: PFLU_RS15285 - circularly permuted type 2 ATP-grasp protein, at 3,423,883 to 3,425,292 _RS15285
Group Condition PFLU_RS15265 PFLU_RS15270 PFLU_RS15275 PFLU_RS15280 PFLU_RS15285
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 +0.2 -2.3 -1.2 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 +0.1 +0.2 -3.4 -0.1
carbon source Phloretic Acid 2 mM (C) -0.6 -0.1 -2.0 +0.2 -0.2
carbon source L-Valine (C) -0.8 -0.3 -0.5 -0.8 +0.2
carbon source Shikimic Acid (C) +0.6 +0.4 -2.8 +0.2 -0.5
pH Growth at pH9 and (C) Trisodium citrate -1.1 -0.1 -1.5 +0.7 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 -0.3 -1.7 +0.3 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.3 -2.4 -0.1 +0.5
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.0 -0.1 -0.9 +0.2 +0.3
stress Betaine (C)(N); with MOPS; with chloride -1.1 -0.2 +0.7 -0.5 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.9 +0.5 +0.1 +0.1 +0.1
carbon source L-Isoleucine (C) +0.5 +0.3 -0.9 -1.0 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.3 -0.4 +1.3 -0.3 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 -0.2 -1.7 +0.4 +0.3
carbon source p-Coumaric 2 mM (C) +0.3 -0.3 -1.3 +0.6 +0.2
carbon source L-Valine (C) +0.6 +0.3 -1.5 +0.2 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.0 +0.4 -1.2 +0.9 +0.3
stress Betaine (C)(N); with MOPS; with chloride +0.6 +0.4 -1.4 +0.7 -0.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.8 -0.4 -1.3 +1.3 -0.0
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.3 +0.5 +0.6 -1.0 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.6 +0.8 -1.0 +0.4
stress Betaine (C)(N); with MOPS; with chloride -0.4 +0.1 +1.3 -0.6 +0.2
stress Betaine (C)(N); with TAPS; with chloride +1.3 +0.4 +0.3 -0.7 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 +0.2 +0.6 -0.7 +0.4
stress Betaine (C)(N); with TAPS; with chloride +0.5 -0.1 +1.1 -0.4 +0.4
carbon source Inosine (C) +0.5 +0.2 +1.1 -0.6 +0.3
carbon source propionate 20 mM (C) +1.1 -0.5 -0.1 +0.9 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.1 +0.3 +0.6 +0.4 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +0.2 +1.3 +0.6 +0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.8 +0.1 +0.9 +1.7 -0.1
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