Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS15040 and PFLU_RS15045 are separated by 11 nucleotidesPFLU_RS15045 and PFLU_RS15050 are separated by 12 nucleotidesPFLU_RS15050 and PFLU_RS15055 are separated by 27 nucleotidesPFLU_RS15055 and PFLU_RS15060 are separated by 11 nucleotides PFLU_RS15040: PFLU_RS15040 - glyoxalase, at 3,363,070 to 3,363,528 _RS15040 PFLU_RS15045: PFLU_RS15045 - glycosyl hydrolase, at 3,363,540 to 3,364,580 _RS15045 PFLU_RS15050: PFLU_RS15050 - SDR family oxidoreductase, at 3,364,593 to 3,365,387 _RS15050 PFLU_RS15055: PFLU_RS15055 - aldehyde dehydrogenase family protein, at 3,365,415 to 3,366,905 _RS15055 PFLU_RS15060: PFLU_RS15060 - acetolactate synthase large subunit, at 3,366,917 to 3,368,458 _RS15060
Group Condition PFLU_RS15040 PFLU_RS15045 PFLU_RS15050 PFLU_RS15055 PFLU_RS15060
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.0 -0.1 -1.0 +0.2 -1.8
carbon source p-Coumaric (C) 5 mM -0.9 -0.9 -0.3 -0.2 -0.9
carbon source Inosine (C) -0.7 -0.2 -1.0 -0.0 -0.8
no stress control Glycine betaine (C)(N); with TAPS +0.3 -0.8 -0.8 -0.4 -0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.7 -1.1 -1.1 -0.4 -0.1
carbon source L-Lysine (C) -0.2 -1.4 +0.5 +0.1 -0.9
carbon source p-Coumaric (C) 5 mM -0.3 -1.0 -0.5 +0.5 -0.4
carbon source Inosine (C) -0.2 -1.1 +0.7 -1.0 -0.1
temperature shift Temperature shift 10_to_25; with MOPS +0.1 +0.6 -1.9 -0.3 -0.2
carbon source D-Glucosamine Hydrochloride 10 mM (C) -2.2 -0.2 +0.4 +0.1 +0.3
carbon source L-Arabinose (C); with MOPS -0.2 -1.8 +0.3 -0.0 +0.5
carbon source L-Valine (C) -1.3 -0.0 +0.4 -0.7 +0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.9 -0.7 -0.7 -0.7
carbon source m-Inositol (C) -0.5 +0.5 -0.9 -0.5 +0.3
stress L-Glutamine (C)(N); with MOPS; with chloride +0.2 +0.5 -1.3 +0.1 -0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 +0.2 +0.6 -0.1 -1.2
stress Betaine (C)(N); with MOPS; with chloride +1.0 -1.0 -1.5 +0.6 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.1 +0.1 -1.7 -0.3 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.1 +0.3 -0.1 -0.1 +1.1
carbon and nitrogen source NAG carbon and (N) -1.3 +1.0 +0.2 -0.1 +0.4
carbon source 4-Aminobutyric (C) -0.4 +0.2 +0.6 +0.9 -1.1
carbon source NAG (C) -0.8 +0.4 +0.4 -0.5 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.4 +0.4 -0.8 +0.2 -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.0 +0.0 +0.6 +0.3 -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +0.8 +0.1 -1.1 +0.8
temperature shift Temperature shift 30_to_25; with MOPS -0.6 +0.7 -0.2 +0.5 +0.7
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +1.3 +0.8 -0.2 +0.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.1 -0.1 +0.8 +0.4 -0.5
carbon source Shikimic Acid (C) -0.7 +1.2 +0.7 +0.2 +0.4
stress L-Glutamine (C)(N); with TAPS; with chloride +0.7 +0.8 +0.7 -0.1 +0.3
remove
PFLU_RS15040
plot		 remove
PFLU_RS15045
plot		 remove
PFLU_RS15050		 remove
PFLU_RS15055
plot		 remove
PFLU_RS15060
plot