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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS14820 and PFLU_RS14825 overlap by 1 nucleotides
PFLU_RS14825 and PFLU_RS14830 are separated by 2 nucleotides
PFLU_RS14830 and PFLU_RS14835 are separated by 413 nucleotides
PFLU_RS14835 and PFLU_RS14840 are separated by 108 nucleotides
PFLU_RS14820: PFLU_RS14820 - 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase, at 3,315,080 to 3,315,964
_RS14820
PFLU_RS14825: PFLU_RS14825 - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 3,315,964 to 3,317,955
_RS14825
PFLU_RS14830: PFLU_RS14830 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 3,317,958 to 3,318,983
_RS14830
PFLU_RS14835: PFLU_RS14835 - hypothetical protein, at 3,319,397 to 3,320,221
_RS14835
PFLU_RS14840: PFLU_RS14840 - tyrosine-type recombinase/integrase, at 3,320,330 to 3,321,244
_RS14840
Group
Condition
PFLU
_RS14820
PFLU
_RS14825
PFLU
_RS14830
PFLU
_RS14835
PFLU
_RS14840
carbon source
acetate (C)
-2.8
-1.6
-2.4
-0.5
-0.4
carbon source
NAG (C); with MOPS
-3.5
-1.4
-1.8
-0.2
-0.2
carbon and nitrogen source
NAG carbon and (N); with MOPS
-3.0
-1.5
-1.4
-0.6
-0.3
pH
Growth at pH9 and (C) Trisodium citrate
-2.8
-1.7
-1.7
-0.3
-0.3
carbon and nitrogen source
NAG carbon and (N)
-3.0
-1.4
-1.6
-0.5
-0.3
carbon and nitrogen source
NAG carbon and (N)
-1.6
-1.7
-2.1
-0.5
-0.8
carbon and nitrogen source
NAG carbon and (N); with MOPS
-3.2
-1.3
-1.8
-0.3
-0.1
pH
Growth at pH9 and (C) D-Glucose
-2.6
-1.2
-1.5
-0.6
-0.4
carbon and nitrogen source
NAG carbon and (N)
-2.1
-1.7
-2.1
+0.1
-0.4
carbon source
L-Arabinose (C); with MOPS
-2.3
-1.0
-1.9
-0.8
-0.1
carbon source
acetate (C)
-1.7
-1.5
-1.9
-0.6
-0.2
carbon source
NAG (C)
-1.4
-1.5
-1.9
-0.7
-0.3
temperature
Growth at 34C
-2.0
-1.7
-1.7
-0.0
-0.4
carbon source
NAG (C)
-1.7
-1.9
-1.9
-0.2
-0.1
carbon source
NAG (C)
-0.5
-1.6
-2.3
-1.0
-0.3
carbon source
L-Arabinose (C)
-2.6
-1.5
-0.8
-0.6
-0.1
carbon source
NAG (C); with MOPS
-2.5
-1.3
-1.3
-0.3
-0.1
nitrogen source
NAG (N)
-2.5
-1.2
-1.0
-0.3
-0.2
nitrogen source
no extra (N)
-2.5
-1.0
-1.2
-0.3
-0.2
nitrogen source
Urea (N)
-2.4
-1.1
-1.1
-0.4
-0.1
nitrogen source
nitrite (N)
-2.5
-0.9
-1.4
-0.2
-0.1
temperature
Growth at 34C
-2.1
-1.1
-1.5
-0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
-2.1
-1.4
-1.0
-0.3
-0.1
carbon source
NAG (C)
-2.6
-0.8
-1.4
+0.3
-0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+2.9
-1.7
-1.6
-1.0
-0.6
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+2.4
-1.9
-1.5
-1.2
+0.2
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+2.3
-2.0
-1.0
-0.6
-0.2
carbon source
p-Coumaric (C) 5 mM
+2.1
-1.3
-1.3
-0.7
+0.4
carbon source
p-Coumaric (C) 5 mM
+2.5
-1.8
-1.2
-0.1
+0.3
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
+2.6
-1.5
-0.7
-0.8
+0.1
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