Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS14455 and PFLU_RS14460 are separated by 143 nucleotidesPFLU_RS14460 and PFLU_RS14465 are separated by 69 nucleotidesPFLU_RS14465 and PFLU_RS14470 are separated by 124 nucleotidesPFLU_RS14470 and PFLU_RS14475 are separated by 78 nucleotides PFLU_RS14455: PFLU_RS14455 - hypothetical protein, at 3,237,117 to 3,237,470 _RS14455 PFLU_RS14460: PFLU_RS14460 - DUF1275 domain-containing protein, at 3,237,614 to 3,238,318 _RS14460 PFLU_RS14465: PFLU_RS14465 - ABC-F family ATP-binding cassette domain-containing protein, at 3,238,388 to 3,240,010 _RS14465 PFLU_RS14470: PFLU_RS14470 - DNA topoisomerase IB, at 3,240,135 to 3,241,172 _RS14470 PFLU_RS14475: PFLU_RS14475 - molybdenum ABC transporter ATP-binding protein, at 3,241,251 to 3,242,330 _RS14475
Group Condition PFLU_RS14455 PFLU_RS14460 PFLU_RS14465 PFLU_RS14470 PFLU_RS14475
carbon source Inosine 10 mM (C) +0.0 +0.2 -0.1 -0.5 -3.5
carbon source Guanosine 10 mM (C) -0.1 -0.2 +0.0 +0.2 -3.3
carbon source Inosine 10 mM (C) +0.3 +0.3 -0.1 -0.2 -3.2
carbon source Inosine 10 mM (C) -0.0 -0.0 +0.4 -0.3 -2.8
carbon source Inosine (C) +0.2 -0.2 -0.2 +0.0 -2.4
carbon source octanoate 10 mM (C) -0.3 -0.9 -0.1 +0.1 -1.2
carbon source Guanosine 10 mM (C) +0.2 +0.3 +0.2 -0.1 -3.0
carbon source Xanthosine 10 mM (C) +0.3 +0.3 +0.2 -0.6 -2.4
carbon source Xanthosine 10 mM (C) -0.2 +0.2 +0.3 -0.1 -2.4
carbon source Guanosine 10 mM (C) -0.1 +0.1 -0.1 -0.0 -2.0
carbon source Inosine (C) -0.0 +0.1 +0.1 -0.0 -2.2
carbon source Xanthosine 10 mM (C) +0.2 +0.2 +0.2 -0.3 -2.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.3 +0.1 -0.1 -0.1 -1.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.6 -0.2 +0.2 +0.2 -1.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 +0.4 -0.3 -0.3 -1.2
carbon source L-tyrosine 10 mM (C) +0.2 -0.1 +0.2 +0.3 -1.8
carbon source propionate (C) +0.3 +0.1 -0.2 +0.2 -1.6
carbon source L-Carnitine (C) -0.3 +0.5 -0.5 +0.3 -1.2
carbon source Shikimic Acid (C) -0.5 +0.6 -0.7 +0.1 -0.7
stress Betaine (C)(N); with TAPS; with chloride +0.2 +0.3 -0.1 +0.1 -1.6
carbon source NAG (C) +0.3 -1.3 +0.1 +0.1 -0.3
carbon source acetate (C) -0.3 +0.2 -0.1 +0.5 -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +0.1 -0.2 -0.1 -1.3
nitrogen source nitrate (N); with MOPS +0.0 +0.3 +0.4 -0.3 -1.1
carbon source Quinic Acid (C) -0.7 +0.4 +0.4 +0.1 -0.8
nitrogen source NAG (N); with MOPS -0.9 +0.6 -0.2 +0.6 -0.5
carbon source Xanthosine (C) +0.6 -0.2 -0.0 +0.5 -0.9
carbon source L-Lysine (C) -0.5 +0.5 +0.3 +0.3 -0.6
carbon source L-Valine (C) +0.1 -0.3 +0.4 +1.1 -0.8
carbon source m-Inositol (C) +0.6 -0.1 +0.4 +0.5 -0.8
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