Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS14420 and PFLU_RS14425 are separated by 73 nucleotidesPFLU_RS14425 and PFLU_RS14430 are separated by 43 nucleotidesPFLU_RS14430 and PFLU_RS14435 are separated by 13 nucleotidesPFLU_RS14435 and PFLU_RS14440 are separated by 250 nucleotides PFLU_RS14420: PFLU_RS14420 - chemotactic transduction protein ChpE, at 3,232,114 to 3,232,725 _RS14420 PFLU_RS14425: PFLU_RS14425 - AraC family transcriptional regulator, at 3,232,799 to 3,233,590 _RS14425 PFLU_RS14430: PFLU_RS14430 - arsenate reductase ArsC, at 3,233,634 to 3,234,104 _RS14430 PFLU_RS14435: PFLU_RS14435 - arsenic transporter, at 3,234,118 to 3,235,401 _RS14435 PFLU_RS14440: PFLU_RS14440 - hypothetical protein, at 3,235,652 to 3,235,867 _RS14440
Group Condition PFLU_RS14420 PFLU_RS14425 PFLU_RS14430 PFLU_RS14435 PFLU_RS14440
carbon source propionate 20 mM (C) -0.6 -0.3 -3.4 +0.1 -2.4
no stress control Glycine betaine (C)(N); with MOPS -1.5 -0.2 -1.5 -0.2 -3.1
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.6 -2.3 -0.1 -3.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.6 -3.7 +0.0 -3.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -3.0 +0.0 -3.3 -0.2 +0.6
carbon source L-Carnitine (C) -0.6 +0.2 -2.1 +0.5 -3.3
carbon source p-Coumaric 2 mM (C) +0.0 -1.0 -0.9 +0.1 -3.3
pH Growth at pH6 and (C) D-Glucose -1.8 -0.2 -3.6 -0.1 +0.7
stress Betaine (C)(N); with MOPS; with chloride -1.3 -0.5 -0.8 +0.3 -2.8
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.4 -0.5 -0.5 -0.4 -3.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.6 -0.8 -0.2 -3.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -0.2 -4.5 +0.0 +0.3
stress Betaine (C)(N); with MOPS; with chloride -0.4 -0.6 -1.0 +0.2 -2.9
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.4 -0.5 -2.2 +0.2 -1.6
stress Betaine (C)(N); with MOPS; with chloride -1.8 -0.5 -1.9 +0.5 -0.8
stress Betaine (C)(N); with TAPS; with chloride -1.1 +0.4 -0.9 -0.1 -2.5
carbon source Phloretic Acid 2 mM (C) -0.5 -0.9 -3.4 +0.4 +0.1
carbon source L-Carnitine (C) -0.7 +0.4 -0.9 +0.1 -3.2
pH Growth at pH7 and (C) D-Glucose +0.4 -0.3 -0.4 -0.2 -3.4
pH Growth at pH9 and (C) Trisodium citrate +0.6 +0.1 -1.4 -0.0 -3.4
stress Betaine (C)(N); with MOPS; with chloride -2.0 +0.1 -2.7 +0.1 +0.6
stress Betaine (C)(N); with TAPS; with chloride -1.8 +0.4 -1.7 +0.2 -0.9
carbon source Xanthosine (C) -1.4 +0.2 -0.0 +0.4 -3.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.4 +0.0 -1.1 +0.1 -3.2
no stress control Glycine betaine (C)(N); with MOPS -0.2 +0.3 -1.2 +0.3 -2.9
stress L-Glutamine (C)(N); with MOPS; with chloride +0.1 +0.4 -1.5 +0.1 -2.8
carbon source Inosine (C) +0.8 -0.5 -0.4 +0.3 -3.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.5 +0.2 -2.2 +0.4 -2.6
carbon source Phloretic Acid 2 mM (C) +1.4 -0.1 -1.2 +0.0 -2.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.0 -0.4 +1.4 -0.0 -2.7
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