Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPFLU_RS30810 and PFLU_RS14380 are separated by 595 nucleotidesPFLU_RS14380 and PFLU_RS14385 are separated by 301 nucleotidesPFLU_RS14385 and PFLU_RS31625 are separated by 247 nucleotidesPFLU_RS31625 and PFLU_RS14390 are separated by 47 nucleotides PFLU_RS30810: PFLU_RS30810 - hypothetical protein, at 3,222,716 to 3,222,895 _RS30810 PFLU_RS14380: PFLU_RS14380 - DUF2388 domain-containing protein, at 3,223,491 to 3,223,817 _RS14380 PFLU_RS14385: PFLU_RS14385 - hypothetical protein, at 3,224,119 to 3,224,466 _RS14385 PFLU_RS31625: PFLU_RS31625 - integrase, at 3,224,714 to 3,224,809 _RS31625 PFLU_RS14390: PFLU_RS14390 - hypothetical protein, at 3,224,857 to 3,225,138 _RS14390
Group Condition PFLU_RS30810 PFLU_RS14380 PFLU_RS14385 PFLU_RS31625 PFLU_RS14390
no stress control L-Glutamine (C)(N); with MOPS N.D. -2.1 -0.6 N.D. +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -1.1 -0.8 N.D. -0.5
carbon source L-Carnitine (C) N.D. -0.9 -0.7 N.D. -0.5
stress Betaine (C)(N); with TAPS; with chloride N.D. -1.4 -0.5 N.D. +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. -0.9 -0.0 N.D. -0.9
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS N.D. -0.5 -1.3 N.D. -0.0
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG N.D. -1.6 +0.0 N.D. -0.3
carbon source Inosine (C) N.D. -1.4 +0.2 N.D. -0.5
no stress control Glycine betaine (C)(N); with TAPS N.D. -0.6 -0.5 N.D. -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs N.D. -0.7 -1.3 N.D. +0.3
carbon source D-Xylose (C) N.D. -1.2 -0.4 N.D. -0.0
stress Betaine (C)(N); with MOPS; with chloride N.D. -0.7 -0.6 N.D. -0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -0.3 -1.4 N.D. +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. -0.9 -0.9 N.D. +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. -0.8 -0.5 N.D. -0.2
carbon source L-Isoleucine (C) N.D. +0.2 -0.9 N.D. -0.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. -0.6 -0.8 N.D. +0.2
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG N.D. -1.1 -0.3 N.D. +0.2
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG N.D. -1.4 +0.1 N.D. +0.1
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG N.D. -1.5 +0.3 N.D. +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. -1.1 -0.4 N.D. +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. -0.8 -0.6 N.D. +0.3
no stress control Glycine betaine (C)(N); with MOPS N.D. -1.4 -0.0 N.D. +0.4
carbon source Choline chloride 10 mM (C) N.D. -1.3 +0.1 N.D. +0.3
temperature Growth at 25C N.D. -0.6 -0.6 N.D. +0.4
carbon source Phloretic Acid 2 mM (C) N.D. -0.7 -0.4 N.D. +0.5
nitrogen source NAG (N); with MOPS N.D. +0.6 -0.9 N.D. +0.0
carbon source L-Arabinose (C) N.D. +0.4 -0.9 N.D. +0.4
carbon source 4-Aminobutyric (C) N.D. +0.7 -0.7 N.D. +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -0.5 +0.8 N.D. +0.3
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