Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS13570 and PFLU_RS13575 are separated by 168 nucleotidesPFLU_RS13575 and PFLU_RS13580 are separated by 150 nucleotidesPFLU_RS13580 and PFLU_RS13585 are separated by 258 nucleotidesPFLU_RS13585 and PFLU_RS13590 overlap by 13 nucleotides PFLU_RS13570: PFLU_RS13570 - methyltransferase, at 3,071,819 to 3,072,733 _RS13570 PFLU_RS13575: PFLU_RS13575 - DUF1289 domain-containing protein, at 3,072,902 to 3,073,390 _RS13575 PFLU_RS13580: PFLU_RS13580 - ribonucleotide-diphosphate reductase subunit beta, at 3,073,541 to 3,074,791 _RS13580 PFLU_RS13585: PFLU_RS13585 - DNA-binding protein, at 3,075,050 to 3,075,676 _RS13585 PFLU_RS13590: PFLU_RS13590 - RidA family protein, at 3,075,664 to 3,076,044 _RS13590
Group Condition PFLU_RS13570 PFLU_RS13575 PFLU_RS13580 PFLU_RS13585 PFLU_RS13590
carbon source Xanthosine (C) -0.9 -0.4 -2.5 -1.9 +0.0
no stress control Sucrose (C) and L-Glutamine (N); with MOPS -0.1 -0.3 -3.6 -0.1 +0.0
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG +0.1 -0.6 -3.2 +0.1 +0.1
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG +0.0 -0.3 -2.9 -0.3 +0.1
stress Sucrose (C) and L-Glutamine (N); with MOPS; with PEG -0.1 -0.5 -2.7 +0.2 -0.0
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG -0.1 -0.4 -2.6 +0.0 -0.0
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG -0.2 +0.0 -2.9 -0.0 +0.1
no stress control Sucrose (C) and Ammonium chloride (N); with TAPS -0.2 -0.2 -2.2 -0.1 -0.1
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG -0.3 +0.0 -2.8 +0.2 +0.0
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG -0.3 -0.2 -2.7 +0.2 +0.1
no stress control Sucrose (C) and L-Glutamine (N); with MOPS -0.3 -0.2 -2.7 +0.3 +0.1
stress Sucrose (C) and L-Glutamine (N); with MOPS; with PEG -0.1 -0.8 -1.8 -0.2 +0.1
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG +0.1 -0.1 -2.7 -0.1 +0.0
stress Sucrose (C) and L-Glutamine (N); with MOPS; with PEG -0.2 -0.6 -2.2 +0.2 +0.0
carbon source Inosine (C) +0.5 -0.7 -2.5 +0.3 -0.2
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG -0.0 -0.3 -2.7 +0.2 +0.1
stress Sucrose (C) and L-Glutamine (N); with TAPS +0.1 -0.1 -2.9 +0.2 +0.1
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG +0.0 -0.2 -2.8 +0.4 +0.2
no stress control Sucrose (C) and Ammonium chloride (N); with TAPS +0.1 -0.3 -2.6 +0.2 +0.1
stress Sucrose (C) and L-Glutamine (N); with MOPS +0.1 -0.4 -2.3 +0.3 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -0.1 -2.2 +0.2 +0.2
stress Sucrose (C) and L-Glutamine (N); with MOPS; with PEG -0.2 -0.5 -1.9 +0.3 +0.0
stress Sucrose (C) and L-Glutamine (N); with TAPS; with PEG +0.1 -0.6 -1.9 +0.3 +0.1
stress Sucrose (C) and L-Glutamine (N); with MOPS; with PEG -0.4 -0.5 -1.6 +0.4 +0.0
no stress control Sucrose (C) and Glycine betaine (N); with TAPS +0.1 +0.1 -2.2 +0.4 +0.1
nitrogen source NAG (N); with MOPS -0.3 -0.9 -1.1 +1.3 +0.1
carbon source caffeic 2 mM (C) -0.2 +0.5 +0.7 -1.7 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +0.6 -1.1 +1.0 -0.1
stress Betaine (C)(N); with MOPS; with chloride -0.4 -0.2 +1.2 +1.1 -0.0
pH Growth at pH8 and (C) Trisodium citrate +0.4 +0.0 +1.2 +1.0 -0.2
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