Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS13390 and PFLU_RS13395 are separated by 37 nucleotidesPFLU_RS13395 and PFLU_RS13400 are separated by 10 nucleotidesPFLU_RS13400 and PFLU_RS13405 are separated by 93 nucleotidesPFLU_RS13405 and PFLU_RS13410 are separated by 179 nucleotides PFLU_RS13390: PFLU_RS13390 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 3,024,703 to 3,025,818 _RS13390 PFLU_RS13395: PFLU_RS13395 - carbohydrate ABC transporter permease, at 3,025,856 to 3,026,686 _RS13395 PFLU_RS13400: PFLU_RS13400 - sugar ABC transporter permease, at 3,026,697 to 3,027,587 _RS13400 PFLU_RS13405: PFLU_RS13405 - sugar ABC transporter substrate-binding protein, at 3,027,681 to 3,029,003 _RS13405 PFLU_RS13410: PFLU_RS13410 - AraC family transcriptional regulator, at 3,029,183 to 3,030,088 _RS13410
Group Condition PFLU_RS13390 PFLU_RS13395 PFLU_RS13400 PFLU_RS13405 PFLU_RS13410
carbon source D-Mannitol 10 mM (C) -3.7 -4.3 -4.5 -4.2 -4.1
carbon source D-Mannitol 10 mM (C) -3.7 -4.0 -4.2 -4.4 -4.0
carbon source D-Mannitol (C) -4.1 -4.0 -4.0 -3.3 -3.3
carbon source D-Mannitol 10 mM (C) -3.5 -3.8 -3.2 -3.6 -3.8
carbon source D-Sorbitol 10 mM (C) -4.0 -4.4 -5.1 -4.6 +0.6
carbon source D-Sorbitol 10 mM (C) -4.4 -4.6 -4.8 -4.1 +0.7
carbon source D-Sorbitol 10 mM (C) -4.0 -4.3 -4.5 -4.3 +0.4
carbon source D-Mannitol (C) -3.7 -3.4 -3.1 -3.2 -2.8
carbon source D-Mannitol (C) -3.4 -2.8 -2.4 -2.7 -3.3
carbon source D-Xylose (C) -1.6 -1.4 -1.4 -3.3 -2.6
carbon source D-Xylose (C) -0.6 -1.5 -1.2 -3.2 -2.1
carbon source D-Xylose 10 mM (C) -1.3 -1.1 -1.6 -2.7 -1.3
carbon source Arabitol 10 mM (C) -1.3 -1.7 -1.5 -2.8 -0.4
carbon source D-Xylose 10 mM (C) -1.2 -0.9 -1.0 -2.9 -1.6
carbon source Arabitol 10 mM (C) -1.6 -1.4 -1.2 -2.8 -0.3
carbon source D-Xylose (C) -0.6 -1.0 -1.4 -2.3 -1.7
carbon source D-Xylose 10 mM (C) -1.2 -1.0 -0.9 -2.4 -1.5
carbon source D-Xylose (C) -1.3 -1.4 -0.8 -1.6 -1.8
carbon source Arabitol 10 mM (C) -1.4 -1.3 -1.1 -2.4 -0.3
carbon source D-Xylose (C) -0.7 -0.8 -0.5 -1.3 -1.6
carbon source L-Valine (C) -1.0 -0.4 +0.0 -0.1 -0.8
carbon source D-Fructose (C) -0.3 -0.3 -0.5 -0.8 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 +0.4 -0.6 +0.0 -0.5
carbon source L-Valine (C) -1.3 +0.0 +0.6 +0.3 -0.2
carbon source m-Inositol (C) -0.4 -0.0 +0.7 -0.1 -0.7
pH Growth at pH9 and (C) Trisodium citrate +0.5 +0.3 -0.2 -0.3 -0.5
stress Betaine (C)(N); with MOPS; with chloride +0.6 +0.6 -0.3 -0.1 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.4 +1.1 -0.2 -0.2
carbon source Shikimic Acid (C) +0.4 -0.5 +0.9 +0.2 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 +0.1 +0.5 -0.0 +0.6
remove
PFLU_RS13390
plot		 remove
PFLU_RS13395
plot		 remove
PFLU_RS13400		 remove
PFLU_RS13405
plot		 remove
PFLU_RS13410
plot