Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS13235 and PFLU_RS13240 are separated by 129 nucleotidesPFLU_RS13240 and PFLU_RS13245 overlap by 4 nucleotidesPFLU_RS13245 and PFLU_RS13250 are separated by 45 nucleotidesPFLU_RS13250 and PFLU_RS13255 overlap by 8 nucleotides PFLU_RS13235: PFLU_RS13235 - methyl-accepting chemotaxis protein, at 2,992,143 to 2,993,768 _RS13235 PFLU_RS13240: PFLU_RS13240 - D-glycerate dehydrogenase, at 2,993,898 to 2,994,875 _RS13240 PFLU_RS13245: PFLU_RS13245 - MFS transporter, at 2,994,872 to 2,996,164 _RS13245 PFLU_RS13250: PFLU_RS13250 - sugar kinase, at 2,996,210 to 2,997,151 _RS13250 PFLU_RS13255: PFLU_RS13255 - TIM barrel protein, at 2,997,144 to 2,997,926 _RS13255
Group Condition PFLU_RS13235 PFLU_RS13240 PFLU_RS13245 PFLU_RS13250 PFLU_RS13255
carbon source 2-Keto-D-gluconic hemicalcium salt 10 mM (C) -0.2 -4.3 -4.4 -4.3 -3.6
carbon source 2-Keto-D-gluconic hemicalcium salt 10 mM (C) -0.1 -4.3 -4.2 -3.5 -3.4
carbon source 2-Keto-D-gluconic hemicalcium salt 10 mM (C) +0.1 -4.1 -3.9 -3.4 -3.8
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.3 -3.4 -3.2 -3.0 -2.7
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.1 -3.2 -3.4 -2.5 -3.0
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.0 -3.0 -2.7 -2.4 -2.6
temperature Growth at 10C; with MOPS -0.1 -3.7 -0.7 -0.3 -0.8
temperature Growth at 10C; with MOPS -0.1 -3.0 -0.5 -0.4 -0.3
carbon source Vanillic Acid (C) -0.6 -0.3 -0.9 -0.9 -0.6
temperature Growth at 10C; with MOPS -0.1 -2.7 -0.1 -0.4 +0.0
pH Growth at pH6 and (C) D-Glucose -0.5 -2.1 -0.1 -0.4 -0.1
carbon source Shikimic Acid (C) +0.4 -0.0 -0.8 -1.2 -1.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 -0.6 -1.0 -0.7 -0.2
carbon source gluconate 10 mM (C) +0.1 -2.2 -0.5 -0.2 +0.1
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride -0.1 -2.2 -0.0 -0.6 +0.3
no stress control Glucose (C) and Glycine betaine (N); with MOPS -0.1 -2.5 +0.3 -0.3 +0.0
pH Growth at pH7 and (C) D-Glucose -0.2 -1.8 -0.2 -0.5 +0.3
stress Betaine (C)(N); with TAPS; with chloride +0.2 -0.6 -0.6 -0.6 -0.7
no stress control Glucose (C) and Ammonium chloride (N); with MOPS -0.1 -3.0 +0.4 +0.0 +0.4
no stress control Glucose (C) and Ammonium chloride (N); with MOPS -0.2 -2.8 +0.1 +0.6 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.3 +0.1 -1.2 -0.7 -0.7
no stress control Glucose (C) and Ammonium chloride (N); with MOPS -0.2 -2.1 +0.4 +0.1 -0.0
no stress control Glucose (C) and nitrate (N); with MOPS +0.3 -3.1 +0.5 +0.3 +0.4
no stress control Glucose (C) and nitrate (N); with MOPS +0.1 -2.8 +0.5 +0.1 +0.6
no stress control Glucose (C) and nitrate (N); with MOPS -0.1 -3.2 +0.8 +0.5 +0.8
no stress control Glucose (C) and nitrate (N); with MOPS +0.1 -2.8 +0.4 +0.5 +0.6
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride +0.1 -2.0 +0.1 +0.8 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.6 +0.1 -0.1 +1.2 -0.7
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.6 +0.5 -0.4 +0.5 -0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.4 +1.2 +0.0 -1.6 +0.6
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