Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS13140 and PFLU_RS13145 overlap by 4 nucleotidesPFLU_RS13145 and PFLU_RS13150 are separated by 66 nucleotidesPFLU_RS13150 and PFLU_RS13155 are separated by 342 nucleotidesPFLU_RS13155 and PFLU_RS13160 are separated by 116 nucleotides PFLU_RS13140: PFLU_RS13140 - glucose-6-phosphate dehydrogenase, at 2,970,125 to 2,971,648 _RS13140 PFLU_RS13145: PFLU_RS13145 - Cof-type HAD-IIB family hydrolase, at 2,971,645 to 2,972,469 _RS13145 PFLU_RS13150: PFLU_RS13150 - hypothetical protein, at 2,972,536 to 2,972,796 _RS13150 PFLU_RS13155: PFLU_RS13155 - sigma-54-dependent Fis family transcriptional regulator, at 2,973,139 to 2,974,464 _RS13155 PFLU_RS13160: PFLU_RS13160 - hypothetical protein, at 2,974,581 to 2,975,885 _RS13160
Group Condition PFLU_RS13140 PFLU_RS13145 PFLU_RS13150 PFLU_RS13155 PFLU_RS13160
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 -0.6 -2.8 -0.5 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.3 -0.6 -0.9 -0.0 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.4 +0.1 -1.4 +0.2 -0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.1 -2.0 -0.3 +0.4
carbon source L-Carnitine (C) -0.5 +0.1 -1.5 -0.1 -0.2
pH Growth at pH9 and (C) D-Glucose -0.2 -0.4 -1.3 -0.2 +0.0
carbon source D-Mannitol (C) -0.4 -0.2 -1.2 -0.3 +0.1
carbon source p-Coumaric (C) 5 mM -0.5 -1.1 -0.6 -0.0 +0.1
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride -0.1 -0.1 -1.7 -0.1 +0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.4 +0.2 -1.1 -0.6 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.0 -0.4 -0.7 -0.0 +0.1
stress Betaine (C)(N); with MOPS; with chloride -0.3 -0.5 -1.5 -0.0 +0.4
stress Betaine (C)(N); with MOPS; with chloride -0.3 -0.0 -1.0 -0.8 +0.2
carbon source propionate 20 mM (C) -0.2 -0.5 -1.2 -0.1 +0.1
carbon source Inosine (C) -0.6 +0.2 -1.2 -0.2 +0.1
carbon source NAG (C) -0.9 -0.3 -0.9 +0.2 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 -0.6 -0.3 -1.1 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.3 -1.2 +0.4 -0.4 -0.1
carbon and nitrogen source NAG carbon and (N) -0.4 -0.8 -0.7 -0.0 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.9 -0.3 -0.7 +0.1 +0.2
carbon source propionate 20 mM (C) +0.1 +0.3 -1.2 -0.5 -0.2
carbon source Phloretic Acid 2 mM (C) +0.1 +0.6 -2.1 -0.1 -0.0
carbon source L-Arabinose (C) -0.7 +0.5 -1.2 -0.2 +0.2
carbon source caffeic 2 mM (C) +0.4 -0.8 -0.5 -0.0 -0.3
stress L-Glutamine (C)(N); with TAPS; with chloride -0.3 +0.2 -1.4 -0.1 +0.3
carbon source NAG (C) -0.9 -0.4 -0.3 +0.3 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +0.2 -0.6 -0.8 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.1 +0.1 +0.7 -0.1 -0.1
pH Growth at pH9 and (C) Trisodium citrate -0.1 +0.8 +1.1 -0.4 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.1 +1.5 +0.5 -0.2 +0.3
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