Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS12855 and PFLU_RS12860 are separated by 11 nucleotidesPFLU_RS12860 and PFLU_RS12865 overlap by 4 nucleotidesPFLU_RS12865 and PFLU_RS12870 overlap by 1 nucleotidesPFLU_RS12870 and PFLU_RS12875 are separated by 130 nucleotides PFLU_RS12855: PFLU_RS12855 - ABC transporter ATP-binding protein, at 2,900,568 to 2,902,139 _RS12855 PFLU_RS12860: PFLU_RS12860 - ABC transporter permease, at 2,902,151 to 2,903,176 _RS12860 PFLU_RS12865: PFLU_RS12865 - microcin C ABC transporter permease YejB, at 2,903,173 to 2,904,234 _RS12865 PFLU_RS12870: PFLU_RS12870 - ABC transporter substrate-binding protein, at 2,904,234 to 2,906,093 _RS12870 PFLU_RS12875: PFLU_RS12875 - peptidyl-prolyl cis-trans isomerase, at 2,906,224 to 2,906,505 _RS12875
Group Condition PFLU_RS12855 PFLU_RS12860 PFLU_RS12865 PFLU_RS12870 PFLU_RS12875
temperature shift Temperature shift 30_to_34 -1.0 -1.6 -1.5 -1.5 N.D.
temperature shift Temperature shift 30_to_34 -1.3 -1.3 -1.1 -1.1 N.D.
temperature shift Temperature shift 30_to_34 -0.8 -0.9 -0.9 -0.9 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.1 -0.7 -0.7 -0.9 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 -0.9 -0.8 -0.8 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.0 -0.4 -0.7 -1.0 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS -0.4 -0.5 -0.8 -0.5 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.8 -0.7 -0.5 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 +0.6 +0.6 +0.4 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.6 +0.3 +0.8 +0.4 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 +0.6 +0.6 +0.5 N.D.
carbon source octanoate 10 mM (C) +0.5 +0.4 +0.6 +0.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.4 +0.6 +0.6 +0.6 N.D.
stress Betaine (C)(N); with TAPS; with chloride +0.7 +0.5 +0.9 +0.2 N.D.
carbon source octanoate 10 mM (C) +0.5 +0.7 +0.7 +0.7 N.D.
carbon source p-Coumaric (C) 5 mM +0.7 +0.5 +0.5 +1.0 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.7 +0.7 +0.7 +0.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.6 +0.8 +0.8 +0.8 N.D.
carbon source p-Coumaric (C) 5 mM +0.6 +0.4 +1.0 +0.9 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.6 +0.9 +0.8 +0.8 N.D.
carbon source Ferulic Acid (C) 1.5 mM +0.6 +0.7 +1.2 +0.8 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 +0.9 +1.0 +0.9 N.D.
carbon source p-Coumaric (C) 5 mM +0.4 +0.8 +1.2 +0.9 N.D.
carbon source p-Coumaric (C) 5 mM +0.7 +0.6 +1.0 +1.1 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.7 +0.8 +1.1 +0.9 N.D.
carbon source Ferulic Acid (C) 1.5 mM +0.6 +1.0 +1.3 +1.1 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.7 +1.0 +2.1 +1.5 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 +1.6 +2.0 +1.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.9 +1.7 +1.9 +1.6 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +1.6 +2.2 +1.8 +1.6 N.D.
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