Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS12205 and PFLU_RS30720 are separated by 116 nucleotidesPFLU_RS30720 and PFLU_RS12210 are separated by 329 nucleotidesPFLU_RS12210 and PFLU_RS12215 are separated by 144 nucleotidesPFLU_RS12215 and PFLU_RS12220 are separated by 175 nucleotides PFLU_RS12205: PFLU_RS12205 - DNA binding protein, at 2,707,928 to 2,708,293 _RS12205 PFLU_RS30720: PFLU_RS30720 - helix-turn-helix domain-containing protein, at 2,708,410 to 2,709,372 _RS30720 PFLU_RS12210: PFLU_RS12210 - hypothetical protein, at 2,709,702 to 2,710,160 _RS12210 PFLU_RS12215: PFLU_RS12215 - methyl-accepting chemotaxis protein, at 2,710,305 to 2,711,933 _RS12215 PFLU_RS12220: PFLU_RS12220 - AraC family transcriptional regulator, at 2,712,109 to 2,713,086 _RS12220
Group Condition PFLU_RS12205 PFLU_RS30720 PFLU_RS12210 PFLU_RS12215 PFLU_RS12220
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.8 +0.0 -2.3 -0.3 -2.4
carbon source propionate 20 mM (C) -3.2 -0.4 -0.7 -0.5 -0.8
stress Betaine (C)(N); with TAPS; with chloride -1.6 +0.0 -1.2 -0.4 -1.1
carbon source D-Glucosamine Hydrochloride 10 mM (C) -1.3 -0.6 -1.1 -1.2 +0.1
stress L-Glutamine (C)(N); with MOPS; with chloride -2.3 -0.1 -0.5 +0.3 -0.9
stress L-Glutamine (C)(N); with TAPS; with chloride -1.6 -0.3 -0.7 -0.1 -0.9
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -1.1 +0.1 -0.2 -0.3 -2.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.8 -0.5 +0.0 +0.2 -1.4
carbon source m-Inositol (C) -1.0 +0.3 -1.2 +0.0 -1.5
carbon source propionate 20 mM (C) -0.8 +0.3 -1.5 -0.1 -1.3
stress L-Glutamine (C)(N); with MOPS; with chloride +0.8 -0.0 -2.8 +0.0 -1.1
carbon source L-Lysine (C) -2.2 -0.1 +0.4 -0.1 -1.0
stress Betaine (C)(N); with MOPS; with chloride -1.9 -0.3 -0.2 +0.3 -1.0
carbon source L-Valine 10 mM (C) +0.6 -0.4 -0.8 +0.1 -1.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.2 -0.8 -2.9 +0.3 +0.0
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) +0.9 -0.5 -0.8 +0.0 -1.7
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -2.2 -0.2 +0.5 +0.4 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.3 -0.0 -1.3 -0.5 -1.2
pH Growth at pH8 and (C) Trisodium citrate +1.3 -0.4 -0.3 -0.7 -1.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +0.1 -1.1 -0.0 -1.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.1 +0.3 -1.6 -0.1 -1.3
carbon source p-Coumaric 2 mM (C) +0.8 -0.3 +0.5 +0.1 -2.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +1.0 -0.3 -1.5 -0.7 +1.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.9 -0.2 -1.7 -0.3 +0.9
stress Betaine (C)(N); with TAPS; with chloride +0.4 +0.5 +0.8 -0.0 -1.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +1.2 -0.6 +0.4 +0.2 +1.2
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +0.1 +2.6 +0.0 -0.5
temperature shift Temperature shift 10_to_30 +0.1 +0.7 +3.3 -0.1 -0.0
temperature shift Temperature shift 10_to_30 -0.0 +0.8 +3.6 -0.2 +0.4
temperature shift Temperature shift 10_to_30 -0.0 +0.8 +3.5 -0.2 +0.6
remove
PFLU_RS12205
plot		 remove
PFLU_RS30720
plot		 remove
PFLU_RS12210		 remove
PFLU_RS12215
plot		 remove
PFLU_RS12220
plot