Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS11630 and PFLU_RS11635 are separated by 15 nucleotidesPFLU_RS11635 and PFLU_RS11640 are separated by 11 nucleotidesPFLU_RS11640 and PFLU_RS11645 are separated by 16 nucleotidesPFLU_RS11645 and PFLU_RS11650 are separated by 74 nucleotides PFLU_RS11630: PFLU_RS11630 - MFS transporter, at 2,580,037 to 2,581,359 _RS11630 PFLU_RS11635: PFLU_RS11635 - hypothetical protein, at 2,581,375 to 2,582,364 _RS11635 PFLU_RS11640: PFLU_RS11640 - aldehyde dehydrogenase (NADP(+)), at 2,582,376 to 2,583,956 _RS11640 PFLU_RS11645: PFLU_RS11645 - SMP-30/gluconolactonase/LRE family protein, at 2,583,973 to 2,584,836 _RS11645 PFLU_RS11650: PFLU_RS11650 - arabinose ABC transporter substrate-binding protein, at 2,584,911 to 2,585,915 _RS11650
Group Condition PFLU_RS11630 PFLU_RS11635 PFLU_RS11640 PFLU_RS11645 PFLU_RS11650
carbon source L-Arabinose 10 mM (C) -3.3 -4.4 -3.4 -1.6 -0.9
carbon source L-Arabinose (C); with MOPS -3.2 -3.6 -4.5 -0.8 -1.3
carbon source L-Arabinose (C) -2.8 -3.2 -3.2 -1.6 -2.4
carbon source L-Arabinose (C) -3.4 -4.1 -3.3 -1.5 -1.0
carbon source L-Arabinose (C) -3.2 -3.7 -3.0 -1.4 -1.4
carbon source L-Arabinose 10 mM (C) -3.4 -4.1 -2.9 -1.0 -1.1
carbon source L-Arabinose (C); with MOPS -3.1 -4.0 -3.8 -0.8 -0.5
carbon source L-Arabinose (C); with MOPS -3.2 -4.0 -3.5 -1.1 -0.4
carbon source L-Arabinose (C) -3.4 -3.5 -2.2 -1.9 -1.0
carbon source L-Arabinose 10 mM (C) -3.1 -3.7 -2.8 -0.8 -0.9
carbon source L-Arabinose (C) -2.3 -2.7 -1.6 -2.3 -1.1
carbon source L-Arabinose (C) -1.8 -2.7 -2.4 -1.4 -1.3
carbon source Arabitol 10 mM (C) -1.7 -2.9 -1.9 -0.1 +0.3
carbon source Arabitol 10 mM (C) -1.6 -2.8 -1.9 +0.5 +0.3
carbon source Arabitol 10 mM (C) -1.5 -2.5 -1.5 +0.2 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.1 -0.1 -2.7 -2.1 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.2 -0.8 -1.8 -0.4
carbon source D-(+)-Galactosamine (C) -0.1 -0.1 -0.4 -3.0 +0.8
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.3 -0.1 -1.6 -0.7 -0.7
carbon source D-(+)-Galactosamine (C) -0.1 +0.0 -0.0 -2.7 +0.5
carbon source sn-glycero-3-phosphocholine 10 mM (C) +0.1 -0.1 -0.3 -1.6 +0.5
carbon source 4-Aminobutyric (C) -0.2 +0.1 -1.6 -0.3 +0.5
carbon source D-(+)-Galactosamine (C) -0.1 +0.1 +0.4 -2.1 +0.5
pH Growth at pH8 and (C) Trisodium citrate -0.2 +0.2 -1.5 +0.7 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 -0.5 -0.3 -0.5 +1.0
carbon source D-(+)-Galactosamine 10 mM (C) +0.9 +1.3 +0.3 -4.2 +2.0
carbon source D-(+)-Galactosamine 10 mM (C) +0.9 +1.2 +0.6 -3.6 +1.7
carbon source D-Xylose (C) +0.4 +0.3 -0.9 +1.0 +0.8
carbon source D-(+)-Galactosamine 10 mM (C) +1.2 +1.4 +0.6 -3.6 +2.1
carbon source D-Xylose 10 mM (C) +0.6 +0.5 -0.8 +1.2 +0.3
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