Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS11315 and PFLU_RS11320 are separated by 55 nucleotidesPFLU_RS11320 and PFLU_RS11325 are separated by 270 nucleotidesPFLU_RS11325 and PFLU_RS11330 are separated by 90 nucleotidesPFLU_RS11330 and PFLU_RS11335 are separated by 82 nucleotides PFLU_RS11315: PFLU_RS11315 - carbohydrate porin, at 2,506,145 to 2,507,410 _RS11315 PFLU_RS11320: PFLU_RS11320 - glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase, at 2,507,466 to 2,509,874 _RS11320 PFLU_RS11325: PFLU_RS11325 - helix-turn-helix domain-containing protein, at 2,510,145 to 2,510,891 _RS11325 PFLU_RS11330: PFLU_RS11330 - MFS transporter, at 2,510,982 to 2,512,301 _RS11330 PFLU_RS11335: PFLU_RS11335 - hydroxyacid dehydrogenase, at 2,512,384 to 2,513,361 _RS11335
Group Condition PFLU_RS11315 PFLU_RS11320 PFLU_RS11325 PFLU_RS11330 PFLU_RS11335
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 +0.0 -4.2 -0.2 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 -0.4 -2.4 +0.3 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS -0.1 +0.0 -3.1 +0.1 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 +0.1 -3.2 +0.0 N.D.
carbon source Quinic Acid (C) +0.2 -1.6 -0.7 -0.5 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS -0.1 +0.1 -2.4 +0.0 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 +0.2 -2.7 +0.2 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 -0.1 -2.1 -0.1 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.3 -0.2 -2.0 -0.0 N.D.
carbon source Phloretic Acid 2 mM (C) -0.2 +0.1 -1.9 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.1 -2.0 -0.0 N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.6 +0.1 -1.2 -0.1 N.D.
carbon source Inosine (C) -0.6 -0.1 -1.7 +0.7 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -0.1 -1.7 +0.0 N.D.
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 +0.1 -1.5 -0.3 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +0.1 -1.3 -0.5 N.D.
carbon source D,L-Malic Acid (C) +0.2 -0.2 -1.5 +0.1 N.D.
carbon source L-tyrosine 10 mM (C) -0.3 +0.2 -1.4 +0.1 N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.4 +0.0 -1.3 -0.6 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 +0.3 -1.6 -0.1 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 +0.1 -1.3 +0.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +0.1 -1.7 +0.1 N.D.
carbon source L-Carnitine (C) +0.3 +0.1 -1.3 -0.4 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.2 +0.1 -1.5 +0.3 N.D.
carbon and nitrogen source NAG carbon and (N) +0.3 -0.3 -1.2 +0.2 N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 -0.3 -1.4 +0.4 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.4 -1.8 +0.5 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 +0.2 -1.2 +0.5 N.D.
carbon source L-Valine (C) -0.7 +0.1 +1.5 +0.1 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.6 +0.2 +0.8 +0.4 N.D.
remove
PFLU_RS11315
plot		 remove
PFLU_RS11320
plot		 remove
PFLU_RS11325		 remove
PFLU_RS11330
plot		 remove
PFLU_RS11335
plot