Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS11065 and PFLU_RS11070 are separated by 404 nucleotidesPFLU_RS11070 and PFLU_RS11075 are separated by 102 nucleotidesPFLU_RS11075 and PFLU_RS11080 are separated by 16 nucleotidesPFLU_RS11080 and PFLU_RS11085 are separated by 90 nucleotides PFLU_RS11065: PFLU_RS11065 - hypothetical protein, at 2,442,899 to 2,443,486 _RS11065 PFLU_RS11070: PFLU_RS11070 - TetR/AcrR family transcriptional regulator, at 2,443,891 to 2,444,481 _RS11070 PFLU_RS11075: PFLU_RS11075 - damage-inducible protein DinB, at 2,444,584 to 2,445,150 _RS11075 PFLU_RS11080: PFLU_RS11080 - Crp/Fnr family transcriptional regulator, at 2,445,167 to 2,445,838 _RS11080 PFLU_RS11085: PFLU_RS11085 - hypothetical protein, at 2,445,929 to 2,446,327 _RS11085
Group Condition PFLU_RS11065 PFLU_RS11070 PFLU_RS11075 PFLU_RS11080 PFLU_RS11085
carbon source Xanthosine (C) -0.1 -0.6 -0.3 -0.9 -0.0
carbon source L-Ornithine 10 mM (C) +0.1 -0.5 -0.1 -0.8 -0.3
carbon source L-Carnitine (C) -0.3 -0.7 +0.3 -0.3 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.4 +0.3 -0.6 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 -1.3 -0.1 -0.1 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 -0.4 -0.0 +0.3 -0.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 -1.3 +0.2 +0.4 +0.0
carbon source propionate 20 mM (C) +0.4 -0.5 -0.0 +0.1 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.7 +0.5 -0.2 -0.1 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 -1.1 +0.5 -0.2 -0.3
stress Betaine (C)(N); with TAPS; with chloride -0.3 +0.4 +0.1 -0.4 -0.3
carbon source 4-Guanidinobutyric (C) +0.5 -0.5 +0.2 -0.4 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.7 -0.0 -0.1 +0.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 -0.5 +0.2 -0.3 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.3 +0.6 +0.1 -0.4 +0.1
carbon source Xanthosine (C) -0.3 +0.2 +0.5 -0.5 +0.2
carbon source L-Carnitine (C) -0.4 -0.4 +0.5 +0.1 +0.4
stress Betaine (C)(N); with MOPS; with chloride +0.2 +0.6 +0.0 -0.7 +0.2
temperature shift Temperature shift 10_to_25; with MOPS -0.0 -0.6 +0.4 +0.4 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 +0.6 +0.4 +0.2 -0.5
carbon source Phloretic Acid 2 mM (C) +0.4 +0.2 -0.5 +0.1 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.2 -0.3 +0.2 +0.7
carbon source L-Valine (C) +0.1 -0.5 -0.1 +0.6 +0.8
stress Betaine (C)(N); with TAPS; with chloride +0.4 +0.7 +0.3 -0.2 -0.2
carbon source Shikimic Acid (C) +0.8 -0.4 +0.3 +0.4 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +0.5 +0.0 -0.4 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 +0.7 -0.2 +0.5 +0.2
carbon source Inosine (C) +0.4 +0.1 -0.3 +0.7 +0.3
stress Betaine (C)(N); with MOPS; with chloride +0.4 +0.4 +0.5 +0.4 +0.1
carbon source 4-Aminobutyric (C) +0.6 +0.8 +0.3 +0.4 +0.5
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