Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS09315 and PFLU_RS09320 are separated by 239 nucleotidesPFLU_RS09320 and PFLU_RS09325 overlap by 4 nucleotidesPFLU_RS09325 and PFLU_RS30555 are separated by 204 nucleotidesPFLU_RS30555 and PFLU_RS09330 are separated by 187 nucleotides PFLU_RS09315: PFLU_RS09315 - hypothetical protein, at 2,061,378 to 2,061,641 _RS09315 PFLU_RS09320: PFLU_RS09320 - IS21 family transposase, at 2,061,881 to 2,063,431 _RS09320 PFLU_RS09325: PFLU_RS09325 - transposase, at 2,063,428 to 2,064,177 _RS09325 PFLU_RS30555: PFLU_RS30555 - hypothetical protein, at 2,064,382 to 2,064,453 _RS30555 PFLU_RS09330: PFLU_RS09330 - hypothetical protein, at 2,064,641 to 2,065,021 _RS09330
Group Condition PFLU_RS09315 PFLU_RS09320 PFLU_RS09325 PFLU_RS30555 PFLU_RS09330
nitrogen source NAG (N); with MOPS -0.4 -0.1 -0.2 -4.4 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.8 +0.1 +0.0 -5.0 +0.6
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -1.3 -0.1 +0.1 -3.1 -0.7
pH Growth at pH9 and (C) Trisodium citrate -1.6 -0.2 -0.2 -2.1 -0.7
temperature shift Temperature shift 30_to_25; with MOPS -0.2 +0.0 -0.1 -3.8 -0.2
carbon source 4-Aminobutyric (C) -0.6 +0.1 +0.3 -3.7 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.5 -0.2 +0.2 -4.5 +0.0
stress Sucrose (C) and Glycine betaine (N); with TAPS -0.4 -0.0 -0.3 -3.1 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.9 -0.6 -0.2 -1.3 -0.5
stress Betaine (C)(N); with MOPS; with chloride -0.4 +0.1 +0.0 -2.2 -0.9
carbon source p-Coumaric 2 mM (C) -0.5 -0.3 -0.2 -2.0 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 -0.3 -0.5 -1.9 -0.8
no stress control Glycine betaine (C)(N); with TAPS -0.2 +0.0 +0.2 -2.3 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 +0.1 -0.2 -2.1 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.7 -0.1 +0.0 -3.5 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.0 -0.1 -0.3 -2.9 -0.4
pH Growth at pH8 and (C) Trisodium citrate +0.1 +0.1 -0.0 -2.2 -0.7
carbon source caffeic 2 mM (C) +0.1 +0.2 -0.5 -1.9 -0.6
carbon source D-Xylose (C) +0.5 -0.2 +0.1 -3.0 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.0 -0.2 +0.1 -2.9 +0.5
carbon source D-(+)-Galactosamine (C) -0.3 +0.1 +0.0 -2.6 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.0 -0.1 -0.3 -1.3 +0.4
carbon source L-Valine 10 mM (C) +0.4 -0.2 -0.1 -2.0 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +0.0 -0.2 -2.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +0.0 -0.2 -1.6 -0.8
carbon source acetate (C) -0.3 +0.2 +0.1 -2.0 +0.5
carbon and nitrogen source NAG carbon and (N) +0.5 -0.1 +0.1 -2.2 +0.5
carbon source Inosine (C) -1.3 +0.0 +0.5 -0.7 +0.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -0.0 -0.2 +2.0 -0.5
carbon source Xanthosine (C) -0.2 +0.1 -0.3 +2.5 -0.5
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