Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS09230 and PFLU_RS09235 are separated by 107 nucleotidesPFLU_RS09235 and PFLU_RS09240 are separated by 67 nucleotidesPFLU_RS09240 and PFLU_RS09245 are separated by 110 nucleotidesPFLU_RS09245 and PFLU_RS09250 are separated by 106 nucleotides PFLU_RS09230: PFLU_RS09230 - cupin domain-containing protein, at 2,043,763 to 2,044,074 _RS09230 PFLU_RS09235: PFLU_RS09235 - TDT family transporter, at 2,044,182 to 2,045,330 _RS09235 PFLU_RS09240: PFLU_RS09240 - MFS transporter, at 2,045,398 to 2,047,266 _RS09240 PFLU_RS09245: PFLU_RS09245 - quaternary ammonium compound efflux SMR transporter SugE, at 2,047,377 to 2,047,691 _RS09245 PFLU_RS09250: PFLU_RS09250 - bile acid:sodium symporter family protein, at 2,047,798 to 2,048,763 _RS09250
Group Condition PFLU_RS09230 PFLU_RS09235 PFLU_RS09240 PFLU_RS09245 PFLU_RS09250
stress Betaine (C)(N); with MOPS; with chloride -0.9 -0.3 -0.2 -1.3 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 +0.2 -0.4 -0.9 N.D.
carbon source Xanthosine (C) -0.6 -0.5 -0.2 -0.3 N.D.
carbon source D-Galactose (C) +0.1 -0.3 -0.2 -1.1 N.D.
carbon source L-Carnitine (C) -0.4 -0.5 -0.3 -0.3 N.D.
pH Growth at pH8 and (C) Trisodium citrate -0.6 +0.1 -0.2 -0.6 N.D.
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.5 -0.1 -0.3 -0.3 N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.4 -0.3 +0.0 -0.6 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 +0.2 -0.1 -0.7 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.1 -0.2 -0.8 N.D.
carbon source D,L-Malic Acid (C) -0.3 -0.4 +0.1 -0.5 N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.2 -0.0 +0.2 -1.1 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 -0.5 -0.3 -0.6 N.D.
carbon source L-Isoleucine (C) +0.3 -0.5 -0.2 -0.5 N.D.
stress Betaine (C)(N); with MOPS; with chloride +0.2 -0.1 +0.1 -0.9 N.D.
no stress control L-Glutamine (C)(N); with MOPS -0.6 +0.3 +0.2 -0.6 N.D.
carbon source Choline chloride (C) +0.2 -0.3 +0.0 -0.7 N.D.
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.6 -0.3 +0.0 -0.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.5 +0.1 -0.9 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.7 -0.3 -0.4 -0.2 N.D.
carbon source L-Valine (C) +0.1 -0.5 -0.1 +0.7 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 +0.2 +0.3 -0.6 N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.6 +0.3 +0.1 +0.6 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.3 -0.1 +1.0 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 +0.4 -0.0 +0.6 N.D.
carbon and nitrogen source NAG carbon and (N) -0.3 +0.2 +0.3 +0.6 N.D.
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.4 +0.2 -0.2 +0.6 N.D.
carbon source propionate 20 mM (C) +0.4 -0.4 +0.3 +0.8 N.D.
carbon source p-Coumaric 2 mM (C) +0.1 +0.0 -0.1 +1.2 N.D.
carbon source caffeic 2 mM (C) +0.7 +0.1 -0.3 +0.9 N.D.
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