Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS08865 and PFLU_RS08870 are separated by 10 nucleotidesPFLU_RS08870 and PFLU_RS08875 are separated by 256 nucleotidesPFLU_RS08875 and PFLU_RS08880 are separated by 116 nucleotidesPFLU_RS08880 and PFLU_RS08885 are separated by 134 nucleotides PFLU_RS08865: PFLU_RS08865 - hydroxypyruvate isomerase, at 1,965,250 to 1,966,032 _RS08865 PFLU_RS08870: PFLU_RS08870 - glyoxylate carboligase, at 1,966,043 to 1,967,818 _RS08870 PFLU_RS08875: PFLU_RS08875 - heme-binding protein, at 1,968,075 to 1,968,515 _RS08875 PFLU_RS08880: PFLU_RS08880 - TetR/AcrR family transcriptional regulator, at 1,968,632 to 1,969,237 _RS08880 PFLU_RS08885: PFLU_RS08885 - DUF808 domain-containing protein, at 1,969,372 to 1,970,286 _RS08885
Group Condition PFLU_RS08865 PFLU_RS08870 PFLU_RS08875 PFLU_RS08880 PFLU_RS08885
carbon source Xanthosine (C) -3.8 -3.3 -1.2 +0.7 -1.0
carbon source Inosine 10 mM (C) -2.1 -3.7 -1.8 +0.0 +0.0
carbon source Xanthosine (C) -2.9 -3.1 -0.2 -0.0 -0.6
carbon source Xanthosine 10 mM (C) -3.0 -3.8 -0.1 +0.2 +0.2
carbon source Xanthosine 10 mM (C) -2.4 -3.8 -0.3 +0.2 -0.1
carbon source Inosine 10 mM (C) -1.8 -4.1 -0.6 +0.0 +0.1
carbon source Inosine 10 mM (C) -2.6 -3.9 -0.1 +0.3 +0.1
carbon source Guanosine 10 mM (C) -2.3 -3.7 -0.9 +0.4 +0.2
carbon source Guanosine 10 mM (C) -2.3 -3.6 -0.7 +0.5 +0.1
carbon source Xanthosine 10 mM (C) -1.8 -4.0 -0.1 +0.3 -0.0
carbon source Guanosine 10 mM (C) -2.2 -3.5 +0.7 +0.4 -0.0
carbon source Xanthosine (C) -3.2 -3.5 +0.5 +1.3 +0.4
carbon source Inosine (C) -3.5 -3.1 -2.4 +4.4 +0.4
carbon source Inosine (C) -2.7 -2.8 -2.6 +4.7 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 -0.2 -2.0 -0.4 +0.0
no stress control L-Glutamine (C)(N); with TAPS +0.1 -0.0 -3.3 +0.2 -0.1
pH Growth at pH8 and (C) Trisodium citrate -0.2 -0.5 -2.1 +0.5 -0.3
temperature Growth at 25C +0.3 -0.3 -0.9 +0.2 -1.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 -0.0 -2.2 -0.1 +0.5
pH Growth at pH9 and (C) Trisodium citrate -0.1 -0.3 -1.6 +0.6 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 +0.5 -2.3 +0.3 +0.2
no stress control Glycine betaine (C)(N); with TAPS +0.2 -0.1 -0.9 +0.7 -0.9
carbon source Shikimic Acid (C) -0.3 +0.4 -1.7 +0.7 +0.1
carbon source L-Valine 10 mM (C) +0.5 +0.5 -1.4 -0.1 -0.3
carbon source 4-Aminobutyric (C) -0.3 +0.4 -0.9 +0.8 -0.4
carbon source propionate (C) -0.3 +0.1 -0.9 +1.0 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.6 +0.4 +0.8 -0.3 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.1 +1.6 -0.6 -0.0
pH Growth at pH9 and (C) Trisodium citrate +0.3 -0.3 +1.1 +0.9 -0.0
carbon source L-Valine (C) +0.2 -0.3 +2.2 +0.8 +0.5
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