Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS08845 and PFLU_RS08850 are separated by 34 nucleotidesPFLU_RS08850 and PFLU_RS08855 overlap by 11 nucleotidesPFLU_RS08855 and PFLU_RS08860 are separated by 58 nucleotidesPFLU_RS08860 and PFLU_RS08865 are separated by 145 nucleotides PFLU_RS08845: PFLU_RS08845 - urea transporter, at 1,960,560 to 1,961,435 _RS08845 PFLU_RS08850: PFLU_RS08850 - pyruvate kinase, at 1,961,470 to 1,962,885 _RS08850 PFLU_RS08855: PFLU_RS08855 - glycerate kinase, at 1,962,875 to 1,964,155 _RS08855 PFLU_RS08860: PFLU_RS08860 - 2-hydroxy-3-oxopropionate reductase, at 1,964,214 to 1,965,104 _RS08860 PFLU_RS08865: PFLU_RS08865 - hydroxypyruvate isomerase, at 1,965,250 to 1,966,032 _RS08865
Group Condition PFLU_RS08845 PFLU_RS08850 PFLU_RS08855 PFLU_RS08860 PFLU_RS08865
carbon source Xanthosine (C) -0.5 -0.1 -0.6 -3.8 -3.2
carbon source Xanthosine (C) -0.0 -0.4 -1.3 -3.0 -2.9
carbon source Inosine (C) -0.2 -0.3 +0.1 -3.3 -3.5
carbon source Xanthosine (C) -0.1 -0.3 -0.3 -2.0 -3.8
carbon source Guanosine 10 mM (C) +0.0 -0.4 -0.6 -3.0 -2.3
carbon source Inosine 10 mM (C) -0.0 +0.3 +0.3 -4.1 -2.6
carbon source Xanthosine 10 mM (C) -0.1 -0.2 -0.3 -2.2 -3.0
carbon source Inosine 10 mM (C) +0.2 +0.2 -0.3 -3.3 -2.1
carbon source Inosine (C) -0.0 -1.0 +0.1 -1.5 -2.7
carbon source Guanosine 10 mM (C) +0.1 -0.3 -0.4 -1.6 -2.3
carbon source Xanthosine 10 mM (C) -0.2 +0.0 +0.1 -2.1 -2.4
no stress control Glycine betaine (C)(N); with MOPS -0.2 +0.1 -0.5 -3.6 -0.1
carbon source Guanosine 10 mM (C) -0.1 -0.5 -0.7 -0.7 -2.2
carbon source Xanthosine 10 mM (C) -0.2 -0.2 -0.2 -1.4 -1.8
carbon source Phloretic Acid 2 mM (C) +0.2 -0.7 +0.3 -3.7 +0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 -0.0 +0.3 -3.3 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.1 +0.1 -0.7 -2.4 +0.2
nitrogen source Ammonium chloride (N); with MOPS -0.1 -0.9 -0.3 -1.4 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 -0.7 +0.4 -2.0 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.3 +0.3 -2.3 +0.1
carbon source p-Coumaric (C) -0.1 -0.7 +0.2 -1.4 -0.3
carbon source succinate (C) +0.1 -0.2 +0.0 -2.2 +0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.1 -1.3 +0.2 -1.5 +0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.5 +0.5 -2.0 -0.1
no stress control Glycine betaine (C)(N); with TAPS +0.2 +0.3 -0.8 -1.7 +0.2
carbon and nitrogen source NAG carbon and (N) +0.2 +0.5 -0.3 -0.9 -0.8
stress Betaine (C)(N); with MOPS; with chloride +0.3 -0.3 -0.5 -1.2 +0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.1 +0.6 +0.3 -1.6 -0.0
carbon source Phloretic Acid 2 mM (C) +0.2 -0.1 +0.7 -1.7 +0.2
pH Growth at pH8 and (C) Trisodium citrate -0.1 -1.2 +0.2 +1.1 -0.2
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