Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS08435 and PFLU_RS08440 are separated by 28 nucleotidesPFLU_RS08440 and PFLU_RS08445 are separated by 234 nucleotidesPFLU_RS08445 and PFLU_RS08450 are separated by 79 nucleotidesPFLU_RS08450 and PFLU_RS08455 are separated by 109 nucleotides PFLU_RS08435: PFLU_RS08435 - alpha/beta hydrolase fold domain-containing protein, at 1,881,526 to 1,882,542 _RS08435 PFLU_RS08440: PFLU_RS08440 - organic hydroperoxide resistance protein, at 1,882,571 to 1,882,990 _RS08440 PFLU_RS08445: PFLU_RS08445 - MarR family transcriptional regulator, at 1,883,225 to 1,883,677 _RS08445 PFLU_RS08450: PFLU_RS08450 - LysR family transcriptional regulator, at 1,883,757 to 1,884,707 _RS08450 PFLU_RS08455: PFLU_RS08455 - sulfite exporter TauE/SafE family protein, at 1,884,817 to 1,885,566 _RS08455
Group Condition PFLU_RS08435 PFLU_RS08440 PFLU_RS08445 PFLU_RS08450 PFLU_RS08455
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 N.D. -4.2 -0.6 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 N.D. -3.5 -1.5 +0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 N.D. -3.8 -0.6 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 N.D. -3.4 -0.8 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.0 N.D. -3.3 -1.0 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 N.D. -3.2 -0.7 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 N.D. -3.8 -0.1 +0.0
carbon source NAG (C) +0.1 N.D. -3.0 -0.6 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 N.D. -3.1 -0.2 +0.1
carbon source NAG (C) -0.0 N.D. -2.8 -0.4 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 N.D. -1.1 -0.6 -1.1
carbon source L-Valine 10 mM (C) -0.2 N.D. -1.2 -1.1 -0.6
carbon source acetate 30 mM (C) +0.0 N.D. -2.8 -0.1 -0.2
carbon source L-Valine (C) -0.1 N.D. -1.3 -1.0 -0.5
carbon source acetate 30 mM (C) +0.2 N.D. -2.7 -0.3 -0.1
carbon source propionate 20 mM (C) -0.3 N.D. -1.9 +0.0 -0.5
carbon source L-Valine 10 mM (C) +0.2 N.D. -0.8 -0.9 -1.1
stress malate (C) and Ammonium chloride (N); with TAPS -0.3 N.D. -2.1 +0.0 -0.2
carbon and nitrogen source NAG carbon and (N) +0.1 N.D. -1.7 -0.7 -0.2
carbon source Phloretic Acid 2 mM (C) -0.5 N.D. -2.1 -0.1 +0.1
carbon source m-Inositol (C) +0.2 N.D. -1.3 -0.9 -0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.0 N.D. -2.5 +0.1 +0.0
carbon source NAG (C); with MOPS +0.2 N.D. -1.8 -0.7 +0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 N.D. -1.7 -0.8 +0.2
no stress control L-Glutamine (C)(N); with MOPS -0.0 N.D. -1.4 +0.3 -0.8
carbon source L-Carnitine (C) -0.2 N.D. -0.7 -1.2 +0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 N.D. -1.0 +0.4 -0.9
carbon source NAG (C) +0.4 N.D. -1.4 -0.5 +0.2
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.2 N.D. -1.5 +1.5 +0.0
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.2 N.D. -0.2 +2.9 +0.0
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