Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS08345 and PFLU_RS08350 overlap by 1 nucleotidesPFLU_RS08350 and PFLU_RS08355 are separated by 10 nucleotidesPFLU_RS08355 and PFLU_RS08360 are separated by 58 nucleotidesPFLU_RS08360 and PFLU_RS08365 are separated by 73 nucleotides PFLU_RS08345: PFLU_RS08345 - ABC transporter permease, at 1,866,512 to 1,869,022 _RS08345 PFLU_RS08350: PFLU_RS08350 - ABC transporter ATP-binding protein, at 1,869,022 to 1,869,705 _RS08350 PFLU_RS08355: PFLU_RS08355 - arylesterase, at 1,869,716 to 1,870,321 _RS08355 PFLU_RS08360: PFLU_RS08360 - hypothetical protein, at 1,870,380 to 1,870,673 _RS08360 PFLU_RS08365: PFLU_RS08365 - L,D-transpeptidase family protein, at 1,870,747 to 1,871,712 _RS08365
Group Condition PFLU_RS08345 PFLU_RS08350 PFLU_RS08355 PFLU_RS08360 PFLU_RS08365
temperature Growth at 34C -0.0 -1.3 +0.1 +0.4 -5.0
temperature Growth at 34C -0.1 -0.5 -0.1 +0.0 -4.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -2.8 -0.2 -1.5 -0.5
carbon source Xanthosine (C) -0.2 -2.4 -0.4 -1.1 -0.5
temperature Growth at 34C +0.0 -0.2 +0.0 +0.4 -4.7
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -1.3 -0.1 -0.9 -1.7
carbon and nitrogen source NAG carbon and (N) -0.1 -1.9 +0.1 +0.1 -1.9
pH Growth at pH9 and (C) Trisodium citrate -0.0 -2.1 -0.1 -0.7 -0.7
no stress control Glycine betaine (C)(N); with MOPS -0.2 -1.4 -0.2 -0.9 -0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -1.2 -0.0 -1.7 -0.3
carbon source Inosine (C) -0.1 -2.6 +0.2 +0.2 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.1 -0.6 -0.1 -2.0 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.1 -1.5 +0.2 -1.1 -0.5
carbon and nitrogen source NAG carbon and (N) +0.2 -1.3 +0.2 +0.1 -1.8
carbon source Xanthosine (C) -0.2 -2.4 -0.3 +1.0 -0.3
stress Betaine (C)(N); with TAPS; with chloride +0.3 +0.3 +0.0 -1.9 -0.7
temperature shift Temperature shift 30_to_34 +0.1 -0.3 -0.0 +1.0 -2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 +0.8 +0.2 -1.8 -0.8
carbon source NAG (C) -0.0 -1.5 +0.4 +0.7 -0.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -2.0 +0.1 +1.1 -0.3
carbon source p-Coumaric 2 mM (C) -0.1 -1.9 -0.3 +1.0 +0.1
temperature shift Temperature shift 30_to_34 +0.0 -0.3 -0.1 +1.2 -1.7
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 +1.0 -0.0 -1.8 -0.3
temperature shift Temperature shift 30_to_34 +0.1 +0.1 +0.0 +1.2 -2.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +1.3 -0.4 -1.0 -0.5
carbon source L-Ornithine 10 mM (C) -0.2 +0.0 -0.3 -1.2 +1.4
carbon source L-Carnitine (C) +0.2 +1.2 +0.1 -0.9 -0.6
carbon source p-Coumaric (C) 5 mM -0.1 -1.2 +0.3 -0.1 +1.5
no stress control Glucose (C) and nitrate (N); with TAPS +0.1 +1.8 -0.2 +0.6 -0.4
no stress control Glucose (C) and Ammonium chloride (N); with TAPS -0.1 +1.3 -0.1 +0.6 +1.1
remove
PFLU_RS08345
plot		 remove
PFLU_RS08350
plot		 remove
PFLU_RS08355		 remove
PFLU_RS08360
plot		 remove
PFLU_RS08365
plot