Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS08215 and PFLU_RS08220 are separated by 402 nucleotidesPFLU_RS08220 and PFLU_RS08225 are separated by 9 nucleotidesPFLU_RS08225 and PFLU_RS08230 are separated by 9 nucleotidesPFLU_RS08230 and PFLU_RS08235 are separated by 138 nucleotides PFLU_RS08215: PFLU_RS08215 - ethanolamine permease, at 1,836,342 to 1,837,706 _RS08215 PFLU_RS08220: PFLU_RS08220 - K(+)-transporting ATPase subunit F, at 1,838,109 to 1,838,198 _RS08220 PFLU_RS08225: PFLU_RS08225 - potassium-transporting ATPase subunit KdpA, at 1,838,208 to 1,839,902 _RS08225 PFLU_RS08230: PFLU_RS08230 - potassium-transporting ATPase subunit KdpB, at 1,839,912 to 1,841,975 _RS08230 PFLU_RS08235: PFLU_RS08235 - potassium-transporting ATPase subunit KdpC, at 1,842,114 to 1,842,659 _RS08235
Group Condition PFLU_RS08215 PFLU_RS08220 PFLU_RS08225 PFLU_RS08230 PFLU_RS08235
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 -1.3 -0.1 +0.1 -1.3
carbon source L-Isoleucine (C) -0.2 -0.8 -0.2 +0.1 -0.8
carbon source p-Coumaric 2 mM (C) -0.3 +0.4 -0.1 -0.6 -1.2
carbon source L-Valine (C) -0.1 -0.7 +0.0 -0.2 -0.7
carbon source m-Inositol (C) -0.0 -1.6 +0.1 -0.1 -0.1
carbon source Shikimic Acid (C) +0.1 -0.4 +0.0 -0.2 -1.0
no stress control Glycine betaine (C)(N); with MOPS -0.0 -0.4 -0.1 -0.3 -0.7
carbon source L-Valine 10 mM (C) +0.2 -0.7 +0.1 -0.1 -1.0
carbon source Xanthosine (C) +0.3 -1.2 -0.3 -0.0 +0.0
carbon and nitrogen source NAG carbon and (N) +0.2 -0.8 +0.0 +0.2 -0.8
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.2 +0.0 -0.1 -0.4 -0.9
carbon source D-Glucose (C) +0.1 -0.7 +0.1 +0.0 -0.7
carbon source Shikimic Acid (C) -0.5 +0.2 -0.1 -0.6 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -0.4 +0.2 -0.3 -0.6
carbon source p-Coumaric (C) 5 mM +0.2 -0.7 +0.1 -0.5 +0.4
stress Betaine (C)(N); with MOPS; with chloride -0.1 +0.6 -0.1 -0.3 -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.2 +0.2 -0.3 -0.5 +0.6
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.6 -0.4 -0.1 +0.2 +0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 +0.1 +0.1 +0.6 -0.7
nitrogen source nitrate (N) +0.0 -0.6 +0.2 -0.2 +0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -0.6 +0.2 -0.3 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.9 +0.3 +0.3 +0.3
carbon source NAG (C) +0.4 -0.7 +0.1 -0.0 +0.3
carbon source caffeic 2 mM (C) +0.0 +1.1 -0.3 -0.4 -0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.1 -0.4 +0.2 +0.3 +0.6
stress L-Glutamine (C)(N); with TAPS; with chloride +0.1 -0.3 +0.3 -0.3 +0.8
no stress control Glucose (C) and nitrate (N); with MOPS +0.3 +0.4 -0.0 -0.4 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.1 +1.1 +0.1 -0.3 -0.1
stress Betaine (C)(N); with TAPS; with chloride +0.3 +0.1 +0.2 +0.1 +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +0.8 +0.1 +0.3 +0.8
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