Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS07770 and PFLU_RS07775 are separated by 62 nucleotidesPFLU_RS07775 and PFLU_RS07780 are separated by 110 nucleotidesPFLU_RS07780 and PFLU_RS07785 are separated by 195 nucleotidesPFLU_RS07785 and PFLU_RS07790 are separated by 239 nucleotides PFLU_RS07770: PFLU_RS07770 - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, at 1,730,803 to 1,731,633 _RS07770 PFLU_RS07775: PFLU_RS07775 - DUF4404 family protein, at 1,731,696 to 1,731,962 _RS07775 PFLU_RS07780: PFLU_RS07780 - hypothetical protein, at 1,732,073 to 1,732,681 _RS07780 PFLU_RS07785: PFLU_RS07785 - VacJ family lipoprotein, at 1,732,877 to 1,733,566 _RS07785 PFLU_RS07790: PFLU_RS07790 - PilZ domain-containing protein, at 1,733,806 to 1,734,102 _RS07790
Group Condition PFLU_RS07770 PFLU_RS07775 PFLU_RS07780 PFLU_RS07785 PFLU_RS07790
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +0.3 -0.4 -4.3 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.3 -0.2 -4.7 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.9 -0.6 -1.2 -1.6 +0.9
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.1 -0.0 -4.2 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.0 +0.1 -0.0 -4.5 +0.1
stress malate (C) and Ammonium chloride (N); with TAPS -0.2 -0.1 -0.6 -3.5 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 +0.1 -0.1 -4.3 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.2 -0.5 -3.9 +0.1
stress malate (C) and Ammonium chloride (N); with TAPS -0.1 +0.1 -0.3 -3.6 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 +0.4 -0.3 -4.2 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.1 +0.1 -0.4 -4.0 +0.2
temperature shift Temperature shift 10_to_25; with MOPS -0.2 -2.0 +0.4 -0.7 -1.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.2 -0.2 -3.9 +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 +0.5 -0.2 -4.2 +0.5
carbon source p-Coumaric (C) 5 mM +0.4 -0.2 -0.6 -1.5 -1.8
carbon source acetate (C) -0.2 +0.2 +0.3 -3.2 -0.8
carbon source L-Arabinose (C); with MOPS -0.1 +0.5 -0.5 -3.0 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -0.7 -1.3 -1.5 -0.5
carbon source NAG (C) -0.1 -1.3 +0.5 -2.4 -0.2
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 -0.6 -0.0 -3.2 +0.5
carbon source L-Arabinose (C); with MOPS -0.0 +0.8 -0.2 -3.2 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 +0.3 +0.2 -1.3 +0.6
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.5 -0.8 +0.6 -2.3 -0.6
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.3 -0.6 +0.4 -2.8 +0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.7 -0.7 +0.3 -3.0 +0.3
nitrogen source NAG (N); with MOPS -0.0 -0.4 +1.1 -2.0 -1.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.6 -0.7 +0.1 -2.7 +0.6
carbon source L-tyrosine 10 mM (C) +0.8 +0.5 -0.5 -2.7 -0.2
pH Growth at pH9 and (C) Trisodium citrate -0.1 +1.0 +0.8 -2.5 -0.5
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.6 +0.8 +0.9 -2.0 +0.3
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