Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS06020 and PFLU_RS06030 are separated by 409 nucleotidesPFLU_RS06030 and PFLU_RS06035 overlap by 1 nucleotidesPFLU_RS06035 and PFLU_RS06040 overlap by 4 nucleotidesPFLU_RS06040 and PFLU_RS06045 overlap by 4 nucleotides PFLU_RS06020: PFLU_RS06020 - hypothetical protein, at 1,347,286 to 1,351,860 _RS06020 PFLU_RS06030: PFLU_RS06030 - methyl-accepting chemotaxis protein, at 1,352,270 to 1,353,892 _RS06030 PFLU_RS06035: PFLU_RS06035 - purine-binding chemotaxis protein CheW, at 1,353,892 to 1,354,404 _RS06035 PFLU_RS06040: PFLU_RS06040 - chemotaxis protein CheR, at 1,354,401 to 1,355,660 _RS06040 PFLU_RS06045: PFLU_RS06045 - purine-binding chemotaxis protein CheW, at 1,355,657 to 1,356,355 _RS06045
Group Condition PFLU_RS06020 PFLU_RS06030 PFLU_RS06035 PFLU_RS06040 PFLU_RS06045
stress Betaine (C)(N); with TAPS; with chloride -0.1 -1.4 +0.2 -0.2 -1.9
stress Betaine (C)(N); with TAPS; with chloride -0.1 -0.8 +0.3 +0.2 -2.3
stress Betaine (C)(N); with TAPS; with chloride +0.0 -1.5 +0.4 +0.2 -1.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -1.0 -1.1 +0.4 -0.8
carbon source L-Valine 10 mM (C) -0.1 +0.0 -1.4 -0.6 -0.2
carbon source L-Carnitine (C) -0.2 -0.2 -1.0 -0.3 -0.6
stress Betaine (C)(N); with TAPS; with chloride -0.0 -0.9 +0.0 +0.1 -1.4
stress Betaine (C)(N); with TAPS; with chloride +0.2 -0.9 -0.2 +0.4 -1.7
stress Betaine (C)(N); with TAPS; with chloride +0.0 -1.0 -0.1 +0.3 -1.4
pH Growth at pH8 and (C) Trisodium citrate -0.2 -0.1 -0.4 -0.6 -0.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -0.6 +0.0 -0.2 -1.4
carbon source p-Coumaric 2 mM (C) +0.0 -0.0 -1.3 -0.6 -0.1
stress Betaine (C)(N); with TAPS; with chloride +0.1 -1.2 +0.0 +0.0 -0.9
stress Betaine (C)(N); with TAPS; with chloride -0.0 -0.7 +0.2 +0.1 -1.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 -1.3 -0.7 +0.5 -0.6
stress Betaine (C)(N); with MOPS; with chloride +0.0 -0.8 -0.0 +0.1 -1.2
stress Betaine (C)(N); with MOPS; with chloride +0.1 -0.7 +0.2 +0.2 -1.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.2 -1.1 -0.4 +0.1
stress Betaine (C)(N); with MOPS; with chloride -0.0 -0.9 -0.1 +0.2 -0.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.2 -0.4 +0.2 -1.1
stress Betaine (C)(N); with MOPS; with chloride +0.0 -0.4 +0.3 -0.0 -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.0 -0.4 -1.0 -0.3 +0.4
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) +0.0 -0.3 -0.9 -0.7 +0.7
carbon source caffeic 2 mM (C) -0.2 -0.2 -0.5 +0.4 -0.5
stress Betaine (C)(N); with MOPS; with chloride -0.1 -0.8 -0.5 +0.6 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.0 -0.8 -0.3 +0.6 -0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -0.4 +0.5 +0.3 -1.0
stress Betaine (C)(N); with MOPS; with chloride -0.0 -0.3 +0.6 +0.2 -1.0
carbon source Inosine (C) +0.2 +0.5 -0.5 -0.4 -0.5
temperature shift Temperature shift 10_to_30; with MOPS -0.0 -0.0 +0.4 +0.7 +0.8
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