Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS05580 and PFLU_RS05585 are separated by 228 nucleotidesPFLU_RS05585 and PFLU_RS05590 overlap by 8 nucleotidesPFLU_RS05590 and PFLU_RS05595 overlap by 4 nucleotidesPFLU_RS05595 and PFLU_RS05600 are separated by 119 nucleotides PFLU_RS05580: PFLU_RS05580 - MipA/OmpV family protein, at 1,258,645 to 1,259,415 _RS05580 PFLU_RS05585: PFLU_RS05585 - MtnX-like HAD-IB family phosphatase, at 1,259,644 to 1,260,348 _RS05585 PFLU_RS05590: PFLU_RS05590 - aminotransferase class III-fold pyridoxal phosphate-dependent enzyme, at 1,260,341 to 1,261,735 _RS05590 PFLU_RS05595: PFLU_RS05595 - alpha/beta fold hydrolase, at 1,261,732 to 1,262,631 _RS05595 PFLU_RS05600: PFLU_RS05600 - GNAT family N-acetyltransferase, at 1,262,751 to 1,263,875 _RS05600
Group Condition PFLU_RS05580 PFLU_RS05585 PFLU_RS05590 PFLU_RS05595 PFLU_RS05600
carbon source NAG (C) -0.8 -1.7 -1.7 -1.6 -0.6
carbon source acetate (C) -0.6 -1.4 -1.6 -1.3 -0.9
pH Growth at pH9 and (C) D-Glucose -0.1 -3.1 -0.6 -1.1 -0.9
carbon source acetate (C) -0.6 -1.7 -1.2 -1.9 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.8 -1.2 -1.2 -1.2 -1.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.6 -0.8 -0.8 -0.9 -1.3
carbon source NAG (C) -0.7 -1.5 -1.8 -1.1 -0.1
carbon and nitrogen source NAG carbon and (N) -0.7 -1.1 -1.6 -1.4 -0.4
nitrogen source Urea (N) -0.6 -1.4 -1.4 -1.3 -0.6
carbon source acetate (C) -0.5 -0.7 -1.4 -1.7 -0.7
carbon and nitrogen source NAG carbon and (N) -0.3 -0.9 -2.0 -1.4 -0.4
carbon source Shikimic Acid (C) +0.2 -2.7 -1.2 -1.0 -0.2
stress Betaine (C)(N); with MOPS; with chloride -0.4 -1.3 -1.1 -1.0 -1.1
carbon source NAG (C) -0.5 -0.2 -1.7 -1.5 -0.8
carbon source L-Arabinose (C) -1.1 -1.3 -0.9 -1.0 -0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.2 -1.3 -0.4 -0.9 -1.0
carbon source D-Xylose (C) -0.1 -1.8 -1.0 -1.2 -0.5
carbon source propionate (C) -0.1 -1.5 -0.9 -1.5 -0.4
carbon source Trisodium citrate (C) -0.4 -0.7 -1.3 -1.8 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.3 -0.8 -0.7 -0.7 -0.9
pH Growth at pH7 and (C) D-Glucose -0.3 -1.6 -0.8 -1.3 -0.4
stress Betaine (C)(N); with MOPS; with chloride -0.1 -1.1 -1.4 -1.1 -0.6
stress Betaine (C)(N); with MOPS; with chloride -0.6 -0.5 -1.6 -0.8 -0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.7 -1.1 -0.9 -1.3 -0.2
nitrogen source Urea (N) -0.2 -1.7 -0.9 -0.8 -0.5
carbon source Fumarate (C) -0.0 -2.1 -0.9 -0.8 -0.3
carbon and nitrogen source NAG carbon and (N) -0.6 -0.6 -1.0 -1.3 -0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 -1.1 -1.5 -0.7 +0.3
carbon source D-Mannitol (C) -0.4 +0.5 -1.3 -1.9 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 +1.5 +0.9 +0.5 +0.7
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