Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS05140 and PFLU_RS05145 are separated by 213 nucleotidesPFLU_RS05145 and PFLU_RS05150 are separated by 59 nucleotidesPFLU_RS05150 and PFLU_RS05155 are separated by 107 nucleotidesPFLU_RS05155 and PFLU_RS05160 are separated by 104 nucleotides PFLU_RS05140: PFLU_RS05140 - LysR family transcriptional regulator, at 1,146,519 to 1,147,466 _RS05140 PFLU_RS05145: PFLU_RS05145 - HPF/RaiA family ribosome-associated protein, at 1,147,680 to 1,148,090 _RS05145 PFLU_RS05150: PFLU_RS05150 - MFS transporter, at 1,148,150 to 1,149,664 _RS05150 PFLU_RS05155: PFLU_RS05155 - LysR family transcriptional regulator, at 1,149,772 to 1,150,683 _RS05155 PFLU_RS05160: PFLU_RS05160 - TonB-dependent receptor family protein, at 1,150,788 to 1,153,124 _RS05160
Group Condition PFLU_RS05140 PFLU_RS05145 PFLU_RS05150 PFLU_RS05155 PFLU_RS05160
stress Betaine (C)(N); with MOPS; with chloride -2.4 +0.0 -0.0 -0.6 +0.1
stress Betaine (C)(N); with MOPS; with chloride -2.3 +0.4 -0.5 -0.3 +0.1
stress Betaine (C)(N); with MOPS; with chloride -2.7 -0.0 +0.1 +0.2 +0.2
stress Betaine (C)(N); with MOPS; with chloride -2.1 +0.3 -0.3 -0.1 +0.1
pH Growth at pH8 and (C) Trisodium citrate +0.1 -0.3 -0.1 -0.1 -1.3
pH Growth at pH9 and (C) Trisodium citrate +0.3 +0.1 +0.1 -0.9 -1.2
stress Betaine (C)(N); with TAPS; with chloride -1.1 +0.2 +0.2 -0.3 +0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.7 -1.5 -0.1 -0.2 +0.2
stress Betaine (C)(N); with TAPS; with chloride -1.4 +0.2 +0.1 +0.1 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.0 -1.0 +0.2 -0.8 -0.3
stress Betaine (C)(N); with TAPS; with chloride -1.3 +0.3 +0.3 +0.0 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.3 -0.1 -0.5 -0.4
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.8 -1.1 -0.0 -0.2 +0.1
pH Growth at pH9 and (C) Trisodium citrate +0.3 +0.0 +0.1 +0.4 -1.1
stress Betaine (C)(N); with TAPS; with chloride -0.4 +0.6 -0.0 -0.8 +0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 -0.4 +0.3 +0.3 -0.7
carbon source propionate 20 mM (C) -0.3 +0.5 -0.1 -0.5 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.7 +0.4 -0.1 +0.7 -0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.4 -0.7 +0.4 +0.0 -0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 +0.8 -0.2 +0.5 +0.5
stress Betaine (C)(N); with MOPS; with chloride +0.0 +1.0 +0.2 +0.3 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.6 -0.6 -0.1 +0.6 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.5 -0.2 +0.5 -0.2 -0.1
carbon source propionate 20 mM (C) -0.5 +1.0 +0.0 +0.5 +0.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 +2.0 +0.3 -0.0 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.3 +2.0 +0.2 -0.4 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.5 +2.0 +0.3 -0.5 -0.1
carbon source acetate 30 mM (C) +0.1 +1.8 +0.4 -0.0 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.3 +1.8 +0.0 +0.6 +0.1
carbon source acetate 30 mM (C) +0.1 +2.0 +0.3 +0.2 +0.2
remove
PFLU_RS05140
plot		 remove
PFLU_RS05145
plot		 remove
PFLU_RS05150		 remove
PFLU_RS05155
plot		 remove
PFLU_RS05160
plot