Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS04310 and PFLU_RS04315 overlap by 1 nucleotidesPFLU_RS04315 and PFLU_RS04320 are separated by 51 nucleotidesPFLU_RS04320 and PFLU_RS04325 are separated by 70 nucleotidesPFLU_RS04325 and PFLU_RS04330 are separated by 76 nucleotides PFLU_RS04310: PFLU_RS04310 - rod shape-determining protein MreC, at 973,309 to 974,382 _RS04310 PFLU_RS04315: PFLU_RS04315 - rod shape-determining protein MreD, at 974,382 to 974,870 _RS04315 PFLU_RS04320: PFLU_RS04320 - septum formation inhibitor Maf, at 974,922 to 975,518 _RS04320 PFLU_RS04325: PFLU_RS04325 - ribonuclease G, at 975,589 to 977,046 _RS04325 PFLU_RS04330: PFLU_RS04330 - TIGR02099 family protein, at 977,123 to 980,938 _RS04330
Group Condition PFLU_RS04310 PFLU_RS04315 PFLU_RS04320 PFLU_RS04325 PFLU_RS04330
temperature shift Temperature shift 30_to_34 N.D. -4.9 +0.3 -2.9 -2.8
carbon source NAG (C) N.D. -4.3 -0.6 -2.9 -1.5
temperature shift Temperature shift 30_to_34 N.D. -4.1 -0.1 -2.4 -2.5
carbon source NAG (C); with MOPS N.D. -4.9 -0.5 -2.5 -0.8
carbon and nitrogen source NAG carbon and (N) N.D. -4.5 -0.4 -1.5 -2.0
carbon source L-tyrosine 10 mM (C) N.D. -3.5 +0.4 -2.3 -2.8
carbon and nitrogen source NAG carbon and (N); with MOPS N.D. -4.4 -0.6 -2.0 -1.2
carbon and nitrogen source NAG carbon and (N) N.D. -3.9 -0.5 -1.7 -1.9
carbon and nitrogen source NAG carbon and (N); with MOPS N.D. -4.6 -0.1 -2.3 -0.9
temperature shift Temperature shift 30_to_34 N.D. -2.6 -0.0 -2.5 -2.2
carbon source L-tyrosine 10 mM (C) N.D. -3.1 +0.7 -2.4 -2.6
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.5 -0.4 -1.2 -1.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.9 -0.2 -1.3 -0.8
carbon source NAG (C) N.D. -3.1 -0.7 -2.2 -1.2
pH Growth at pH9 and (C) D-Glucose N.D. -4.3 -0.4 -1.6 -0.8
carbon and nitrogen source NAG carbon and (N) N.D. -3.4 -0.5 -1.6 -1.7
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.4 -0.2 -1.6 -0.9
carbon source NAG (C); with MOPS N.D. -3.2 -0.1 -2.7 -1.0
carbon and nitrogen source NAG carbon and (N); with MOPS N.D. -3.8 -0.1 -2.0 -1.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.7 -0.7 -1.1 -0.3
stress malate (C) and Ammonium chloride (N); with TAPS N.D. -5.1 -0.4 -0.8 -0.5
nitrogen source NAG (N) N.D. -3.4 -0.3 -1.9 -1.0
carbon source L-Valine 10 mM (C) N.D. +1.5 -0.5 +4.4 +0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. +4.7 +0.1 +2.0 +1.4
carbon source p-Coumaric (C) 5 mM N.D. +5.7 +0.0 +2.2 +2.6
carbon source p-Coumaric (C) 5 mM N.D. +6.5 -0.4 +2.2 +2.9
carbon source Ferulic Acid (C) 1.5 mM N.D. +6.8 +0.0 +2.2 +2.3
carbon source Ferulic Acid (C) 1.5 mM N.D. +6.9 +0.2 +2.0 +2.3
carbon source p-Coumaric (C) 5 mM N.D. +6.7 -0.1 +1.9 +3.0
carbon source p-Coumaric (C) 5 mM N.D. +7.3 -0.3 +2.2 +3.0
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