Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS04225 and PFLU_RS04230 are separated by 186 nucleotidesPFLU_RS04230 and PFLU_RS04235 are separated by 244 nucleotidesPFLU_RS04235 and PFLU_RS04240 are separated by 54 nucleotidesPFLU_RS04240 and PFLU_RS04245 are separated by 142 nucleotides PFLU_RS04225: PFLU_RS04225 - hypothetical protein, at 955,851 to 956,045 _RS04225 PFLU_RS04230: PFLU_RS04230 - hypothetical protein, at 956,232 to 957,389 _RS04230 PFLU_RS04235: PFLU_RS04235 - 5-dehydro-4-deoxyglucarate dehydratase, at 957,634 to 958,545 _RS04235 PFLU_RS04240: PFLU_RS04240 - aldehyde dehydrogenase family protein, at 958,600 to 960,045 _RS04240 PFLU_RS04245: PFLU_RS04245 - MFS transporter, at 960,188 to 961,552 _RS04245
Group Condition PFLU_RS04225 PFLU_RS04230 PFLU_RS04235 PFLU_RS04240 PFLU_RS04245
carbon source D-Glucuronic 10 mM (C) -0.1 -0.3 -3.8 -4.9 +0.0
carbon source D-Glucuronic 10 mM (C) -0.1 -0.3 -4.1 -4.8 +0.1
carbon source D-Galacturonic Acid (C) 5 mM +0.1 -0.2 -2.9 -3.1 -3.0
carbon source D-Glucuronic 10 mM (C) +0.1 -0.3 -4.0 -4.7 +0.0
carbon source D-Glucuronic (C) +0.1 -0.2 -3.6 -3.1 +0.0
carbon source D-Glucuronic (C) +0.0 -0.2 -3.1 -3.1 +0.1
carbon source D-Glucuronic (C) +0.2 -0.2 -2.3 -2.5 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.1 -1.1 -0.2 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 -0.1 -0.2 -0.4 +0.0
pH Growth at pH9 and (C) Trisodium citrate -1.0 -0.1 +0.2 -0.4 -0.0
carbon source Inosine (C) -1.0 +0.2 +0.0 -0.5 +0.0
stress Betaine (C)(N); with MOPS; with chloride -1.1 -0.1 +0.1 -0.0 -0.0
carbon source L-Valine 10 mM (C) -0.2 -0.1 +0.2 -0.4 -0.3
stress Betaine (C)(N); with MOPS; with chloride -0.3 +0.2 -0.4 -0.2 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.6 +0.2 -0.5 +0.1 +0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.6 +0.1 -0.1 -0.3 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 +0.2 -0.6 -0.1 +0.2
carbon source caffeic 2 mM (C) +0.3 -0.2 -0.1 -0.2 -0.4
carbon source m-Inositol (C) -0.5 +0.2 -0.3 -0.1 +0.1
carbon source L-Valine (C) -0.9 -0.0 +0.4 +0.2 -0.1
carbon source NAG (C) -0.8 -0.1 +0.5 +0.1 -0.0
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.4 -0.2 +0.1 -0.3 -0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.4 -0.0 -0.3 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.7 +0.2 -0.6 -0.2 -0.1
carbon source Phloretic Acid 2 mM (C) +0.6 -0.2 -0.1 -0.2 +0.1
temperature Growth at 25C -0.4 +0.1 +0.6 +0.0 +0.1
carbon source p-Coumaric 2 mM (C) +0.7 -0.2 +0.5 -0.3 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 +0.0 +0.5 -0.2 +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.6 -0.1 +0.3 +0.0 +0.1
stress Glucose (C) and Betaine (N); with TAPS; with chloride +0.6 +0.2 +0.2 +0.2 +0.0
remove
PFLU_RS04225
plot		 remove
PFLU_RS04230
plot		 remove
PFLU_RS04235		 remove
PFLU_RS04240
plot		 remove
PFLU_RS04245
plot