Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS04135 and PFLU_RS04140 overlap by 8 nucleotidesPFLU_RS04140 and PFLU_RS04145 are separated by 97 nucleotidesPFLU_RS04145 and PFLU_RS04150 are separated by 124 nucleotidesPFLU_RS04150 and PFLU_RS04155 are separated by 147 nucleotides PFLU_RS04135: PFLU_RS04135 - HAMP domain-containing histidine kinase, at 938,683 to 939,945 _RS04135 PFLU_RS04140: PFLU_RS04140 - response regulator transcription factor, at 939,938 to 940,498 _RS04140 PFLU_RS04145: PFLU_RS04145 - ABC transporter ATP-binding protein/permease, at 940,596 to 942,320 _RS04145 PFLU_RS04150: PFLU_RS04150 - DUF1043 family protein, at 942,445 to 942,882 _RS04150 PFLU_RS04155: PFLU_RS04155 - alpha/beta fold hydrolase, at 943,030 to 943,659 _RS04155
Group Condition PFLU_RS04135 PFLU_RS04140 PFLU_RS04145 PFLU_RS04150 PFLU_RS04155
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +1.0 -2.9 -0.3 -5.6 -0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -1.6 +0.2 -5.4 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -1.1 -0.0 -5.4 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +1.0 -1.4 -0.1 -5.7 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.1 +0.0 +0.1 -5.4 +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.3 +0.3 +0.0 -5.2 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -1.1 -0.0 -4.9 +1.1
stress malate (C) and Ammonium chloride (N); with TAPS +0.0 +1.5 -0.1 -5.9 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.5 +1.2 +0.1 -4.3 +0.5
stress malate (C) and Ammonium chloride (N); with TAPS +0.1 +1.7 -0.1 -5.6 +0.5
stress malate (C) and Ammonium chloride (N); with TAPS +0.3 +2.0 -0.1 -5.8 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.6 +1.7 -0.0 -4.5 +0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +2.5 -0.6 -0.0 -4.3 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +2.3 -0.6 +0.2 -4.5 +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +2.4 +0.1 +0.1 -4.5 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +2.9 +0.4 +0.2 -4.8 +0.3
carbon source L-tyrosine 10 mM (C) +1.0 +2.4 -0.1 -3.7 +0.7
carbon and nitrogen source NAG carbon and (N) -0.2 +2.3 +0.1 -3.1 +1.5
temperature shift Temperature shift 30_to_34 +0.8 +2.6 -0.0 -3.2 +0.7
temperature shift Temperature shift 30_to_34 +0.7 +2.5 +0.1 -3.1 +0.8
carbon source Inosine (C) +0.9 +2.9 +0.2 -1.6 +1.9
carbon source Vanillic Acid (C) +1.5 +2.7 +0.2 -1.7 +1.8
carbon source Vanillic Acid (C) +1.3 +3.0 +0.2 -1.7 +1.7
carbon source Vanillic Acid (C) +1.2 +3.0 +0.2 -1.1 +1.8
carbon source Ferulic Acid (C) 1.5 mM +2.1 -0.1 +0.1 +5.2 +0.0
carbon source Ferulic Acid (C) 1.5 mM +2.3 -0.1 +0.0 +6.0 +0.2
carbon source p-Coumaric (C) 5 mM +2.5 -1.1 +0.0 +8.7 -0.1
carbon source p-Coumaric (C) 5 mM +2.0 -0.6 +0.1 +8.5 +0.5
carbon source p-Coumaric (C) 5 mM +2.2 -0.0 +0.2 +8.4 +0.3
carbon source p-Coumaric (C) 5 mM +2.4 -0.2 +0.1 +8.3 +0.8
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