Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS03975 and PFLU_RS03980 are separated by 61 nucleotidesPFLU_RS03980 and PFLU_RS03985 overlap by 4 nucleotidesPFLU_RS03985 and PFLU_RS03990 are separated by 230 nucleotidesPFLU_RS03990 and PFLU_RS03995 are separated by 129 nucleotides PFLU_RS03975: PFLU_RS03975 - DUF1631 domain-containing protein, at 896,634 to 898,784 _RS03975 PFLU_RS03980: PFLU_RS03980 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 898,846 to 899,409 _RS03980 PFLU_RS03985: PFLU_RS03985 - membrane protein, at 899,406 to 900,242 _RS03985 PFLU_RS03990: PFLU_RS03990 - methyl-accepting chemotaxis protein, at 900,473 to 902,503 _RS03990 PFLU_RS03995: PFLU_RS03995 - hypothetical protein, at 902,633 to 903,061 _RS03995
Group Condition PFLU_RS03975 PFLU_RS03980 PFLU_RS03985 PFLU_RS03990 PFLU_RS03995
carbon source Xanthosine (C) -0.1 -2.2 -0.8 -0.2 -3.1
carbon and nitrogen source NAG carbon and (N) +0.2 -3.2 -0.6 -0.1 -1.9
carbon source Xanthosine (C) -0.0 -1.5 -0.0 -0.1 -4.0
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.2 -2.0 +0.1 +0.0 -3.5
carbon source propionate (C) +0.1 -1.2 -0.1 +0.0 -4.3
temperature Growth at 25C -0.2 -1.0 -1.5 -0.1 -2.6
carbon source NAG (C) +0.3 -3.2 -0.3 +0.3 -1.7
carbon source Phloretic Acid 2 mM (C) -0.1 -1.3 +0.2 -0.1 -3.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.1 -0.9 -0.1 +0.2 -3.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 -0.5 -1.0 -0.0 -3.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 -0.6 -0.3 +0.0 -3.8
nitrogen source nitrate (N) +0.0 -1.3 +0.1 +0.1 -3.4
carbon source D-Xylose (C) -0.0 -0.0 +0.2 +0.2 -4.7
carbon source propionate 20 mM (C) +0.4 -1.7 -0.0 +0.0 -3.1
carbon source NAG (C) +0.4 -3.7 -0.6 -0.1 -0.2
carbon and nitrogen source NAG carbon and (N); with MOPS -0.1 -4.2 -0.4 +0.2 +0.4
carbon and nitrogen source NAG carbon and (N); with MOPS -0.1 -3.9 -0.6 -0.0 +1.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 +0.6 +0.4 +0.0 -3.9
carbon and nitrogen source NAG carbon and (N); with MOPS +0.2 -3.8 -0.4 +0.0 +1.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 +1.1 +0.1 +0.0 -4.1
carbon and nitrogen source NAG carbon and (N) +0.2 -3.8 +0.0 -0.2 +1.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +1.2 -0.1 -0.0 -3.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 +1.3 -0.3 -0.4 -2.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 +1.3 +0.2 -0.2 -3.5
carbon source L-Arabinose (C); with MOPS -0.1 -2.7 +0.3 +0.1 +2.0
carbon source L-Arabinose (C) -0.1 -2.5 -0.0 +0.1 +2.2
carbon source p-Coumaric (C) 5 mM +0.1 +5.3 +0.1 -0.0 -0.3
carbon source p-Coumaric (C) 5 mM -0.2 +5.2 +0.1 -0.3 +0.7
carbon source p-Coumaric (C) 5 mM -0.0 +4.9 +0.1 +0.1 +0.9
carbon source p-Coumaric (C) 5 mM -0.1 +5.4 +0.2 -0.1 +0.9
remove
PFLU_RS03975
plot		 remove
PFLU_RS03980
plot		 remove
PFLU_RS03985		 remove
PFLU_RS03990
plot		 remove
PFLU_RS03995
plot