Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS03660 and PFLU_RS03665 overlap by 7 nucleotidesPFLU_RS03665 and PFLU_RS03670 overlap by 8 nucleotidesPFLU_RS03670 and PFLU_RS03675 are separated by 112 nucleotidesPFLU_RS03675 and PFLU_RS03680 are separated by 136 nucleotides PFLU_RS03660: PFLU_RS03660 - peptide chain release factor N(5)-glutamine methyltransferase, at 840,125 to 840,955 _RS03660 PFLU_RS03665: PFLU_RS03665 - molybdopterin-synthase adenylyltransferase MoeB, at 840,949 to 841,704 _RS03665 PFLU_RS03670: PFLU_RS03670 - glutamate racemase, at 841,697 to 842,491 _RS03670 PFLU_RS03675: PFLU_RS03675 - acyloxyacyl hydrolase, at 842,604 to 843,122 _RS03675 PFLU_RS03680: PFLU_RS03680 - YkgJ family cysteine cluster protein, at 843,259 to 843,564 _RS03680
Group Condition PFLU_RS03660 PFLU_RS03665 PFLU_RS03670 PFLU_RS03675 PFLU_RS03680
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -3.9 N.D. -0.4 -0.9
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.6 N.D. +0.1 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -4.3 N.D. -0.0 -0.3
carbon source Xanthosine (C) N.D. -3.4 N.D. -0.3 -0.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -3.8 N.D. +0.0 -0.4
carbon source Guanosine 10 mM (C) N.D. -3.8 N.D. -0.1 -0.2
stress Betaine (C)(N); with MOPS; with chloride N.D. -3.8 N.D. -0.2 -0.0
stress Betaine (C)(N); with TAPS; with chloride N.D. -3.3 N.D. -0.1 -0.7
carbon source Citraconic 20 mM (C) N.D. -3.5 N.D. -0.3 -0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. -3.3 N.D. -0.3 -0.2
stress Betaine (C)(N); with MOPS; with chloride N.D. -3.4 N.D. -0.3 -0.0
stress Betaine (C)(N); with MOPS; with chloride N.D. -3.1 N.D. -0.1 -0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. -3.3 N.D. -0.1 -0.4
no stress control Glucose (C) and nitrate (N); with MOPS N.D. -3.9 N.D. +0.1 +0.1
stress Betaine (C)(N); with MOPS; with chloride N.D. -3.4 N.D. -0.0 -0.3
stress malate (C) and Ammonium chloride (N); with TAPS N.D. -3.4 N.D. -0.1 -0.3
carbon source Inosine 10 mM (C) N.D. -3.8 N.D. -0.1 +0.3
no stress control Glucose (C) and nitrate (N); with MOPS N.D. -4.0 N.D. +0.3 +0.0
carbon source Xanthosine 10 mM (C) N.D. -3.5 N.D. +0.1 -0.1
carbon source p-Coumaric (C) 5 mM N.D. -1.9 N.D. -2.0 +0.4
carbon source p-Coumaric (C) 5 mM N.D. -1.4 N.D. -2.2 +0.2
carbon source succinate (C) N.D. -3.6 N.D. +0.1 +0.2
no stress control Glucose (C) and nitrate (N); with MOPS N.D. -3.4 N.D. -0.1 +0.3
stress Betaine (C)(N); with TAPS; with chloride N.D. -3.5 N.D. -0.0 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride N.D. -3.5 N.D. +0.1 +0.3
stress Betaine (C)(N); with MOPS; with chloride N.D. -3.7 N.D. +0.4 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. -3.4 N.D. +0.1 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride N.D. -2.9 N.D. +0.4 -0.5
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride N.D. -3.4 N.D. +0.2 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. -3.1 N.D. +0.3 +0.5
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