Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS02870 and PFLU_RS02875 are separated by 9 nucleotidesPFLU_RS02875 and PFLU_RS02880 are separated by 145 nucleotidesPFLU_RS02880 and PFLU_RS02885 are separated by 30 nucleotidesPFLU_RS02885 and PFLU_RS02890 are separated by 50 nucleotides PFLU_RS02870: PFLU_RS02870 - N-acetyltransferase, at 659,511 to 660,023 _RS02870 PFLU_RS02875: PFLU_RS02875 - urease subunit gamma, at 660,033 to 660,335 _RS02875 PFLU_RS02880: PFLU_RS02880 - urease accessory protein UreD, at 660,481 to 661,320 _RS02880 PFLU_RS02885: PFLU_RS02885 - urea ABC transporter ATP-binding subunit UrtE, at 661,351 to 662,049 _RS02885 PFLU_RS02890: PFLU_RS02890 - urea ABC transporter ATP-binding protein UrtD, at 662,100 to 662,921 _RS02890
Group Condition PFLU_RS02870 PFLU_RS02875 PFLU_RS02880 PFLU_RS02885 PFLU_RS02890
nitrogen source NAG (N); with MOPS -0.9 -1.8 -0.6 -0.9 N.D.
nitrogen source NAG (N); with MOPS -0.9 -2.0 -0.9 -0.3 N.D.
carbon source Xanthosine (C) -0.1 -2.6 -0.1 -0.3 N.D.
nitrogen source nitrate (N); with MOPS -0.3 -1.2 -0.4 -0.8 N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.0 -1.0 -0.9 -0.7 N.D.
nitrogen source NAG (N); with MOPS -0.6 -1.2 -0.5 -0.2 N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -0.9 -1.0 -0.7 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.3 -0.5 -0.2 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -1.9 -0.3 +0.2 N.D.
carbon source Phloretic Acid 2 mM (C) -0.4 -0.4 -1.1 -0.4 N.D.
nitrogen source Urea (N) -0.9 -1.0 -0.2 -0.1 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.7 -0.1 -0.0 N.D.
no stress control Sucrose (C) and Glycine betaine (N); with MOPS +0.3 -1.8 -0.5 -0.0 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -1.0 -0.1 -0.6 N.D.
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.5 -1.1 -0.7 -0.6 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 -1.4 +0.0 -1.2 N.D.
carbon source Phloretic Acid 2 mM (C) -1.4 +0.7 -1.0 +0.0 N.D.
carbon source Phloretic Acid 2 mM (C) +0.4 -0.1 -0.9 -1.0 N.D.
no stress control Glycine betaine (C)(N); with TAPS +0.1 -1.3 +0.3 -0.5 N.D.
pH Growth at pH6 and (C) D-Glucose +0.2 -1.5 -0.4 +0.4 N.D.
stress Betaine (C)(N); with TAPS; with chloride +0.5 +0.1 -1.0 -0.4 N.D.
carbon source Ferulic Acid (C) 1.5 mM -0.8 +0.3 +0.4 -0.5 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 -0.8 +0.3 -0.5 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 -0.6 -0.7 +0.5 N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -1.0 +0.4 +0.7 N.D.
carbon and nitrogen source NAG carbon and (N) -0.5 +1.3 -0.9 +0.1 N.D.
carbon source L-Carnitine (C) +1.1 -0.8 -0.6 +0.3 N.D.
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.7 -0.5 -0.7 +0.6 N.D.
carbon source Quinic Acid (C) -0.3 +1.1 +0.1 -0.8 N.D.
carbon source L-Valine (C) +1.0 +1.0 -0.1 -0.6 N.D.
remove
PFLU_RS02870
plot		 remove
PFLU_RS02875
plot		 remove
PFLU_RS02880		 remove
PFLU_RS02885
plot		 remove
PFLU_RS02890
plot