Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS02825 and PFLU_RS02830 are separated by 229 nucleotidesPFLU_RS02830 and PFLU_RS02835 are separated by 124 nucleotidesPFLU_RS02835 and PFLU_RS02840 are separated by 237 nucleotidesPFLU_RS02840 and PFLU_RS02845 are separated by 111 nucleotides PFLU_RS02825: PFLU_RS02825 - phosphate starvation-inducible protein PsiF, at 647,349 to 647,651 _RS02825 PFLU_RS02830: PFLU_RS02830 - AI-2E family transporter, at 647,881 to 648,894 _RS02830 PFLU_RS02835: PFLU_RS02835 - Hsp70 family protein, at 649,019 to 650,287 _RS02835 PFLU_RS02840: PFLU_RS02840 - DnaJ domain-containing protein, at 650,525 to 651,469 _RS02840 PFLU_RS02845: PFLU_RS02845 - hypothetical protein, at 651,581 to 654,778 _RS02845
Group Condition PFLU_RS02825 PFLU_RS02830 PFLU_RS02835 PFLU_RS02840 PFLU_RS02845
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -4.6 +0.2 +0.0 -0.3 -0.0
pH Growth at pH9 and (C) Trisodium citrate -3.1 -0.6 -0.8 +0.1 +0.0
stress Betaine (C)(N); with MOPS; with chloride -3.4 -0.3 +0.0 -0.2 -0.2
carbon source caffeic 2 mM (C) -3.6 -0.3 -0.1 -0.0 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -2.9 -0.7 -0.2 -0.1 -0.1
carbon source Choline chloride 10 mM (C) -3.7 +0.1 -0.3 +0.3 +0.0
carbon source Shikimic Acid (C) -3.7 -0.1 -0.2 +0.4 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -3.6 +0.0 -0.1 +0.2 +0.0
carbon source propionate 20 mM (C) -3.7 +0.6 -0.2 +0.0 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -3.6 +0.4 -0.2 +0.1 -0.0
carbon source p-Coumaric (C) -2.7 -0.2 -0.4 -0.1 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.6 -0.1 -0.3 -1.3 -0.0
carbon source m-Inositol (C) -2.2 -0.4 -0.3 -0.0 -0.2
carbon source succinate (C) -2.8 -0.2 -0.1 -0.1 +0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -3.0 -0.2 +0.0 +0.2 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.9 +0.3 -0.4 -0.5 +0.0
no stress control Glucose (C) and L-Glutamine (N); with TAPS -2.9 +0.1 +0.0 +0.2 +0.1
carbon source Shikimic Acid (C) -2.9 +0.3 +0.2 -0.2 +0.0
stress Betaine (C)(N); with TAPS; with chloride -2.7 +0.1 +0.4 -0.0 -0.1
carbon source p-Coumaric (C) 5 mM -1.9 +0.4 -0.5 -0.3 +0.1
carbon source Betaine 10 mM (C) -2.1 -0.4 +0.1 +0.2 -0.0
carbon source L-Ornithine (C) -2.6 +0.2 -0.1 +0.2 +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.7 +0.5 -0.0 +0.3 -0.2
carbon source 4-Aminobutyric (C) -2.3 +0.1 -0.0 +0.5 -0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -2.2 +0.8 -0.1 -0.2 +0.3
pH Growth at pH9 and (C) Trisodium citrate +1.3 -0.7 -1.2 -0.7 +0.0
stress Betaine (C)(N); with MOPS; with chloride -1.9 +0.4 -0.2 +0.5 +0.1
carbon source L-Ornithine 10 mM (C) -2.2 +0.3 +0.3 +0.5 -0.0
carbon source propionate 20 mM (C) -2.1 +0.7 +0.1 +0.7 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +2.7 +0.0 -0.3 -1.3 -0.1
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