Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS02695 and PFLU_RS02700 are separated by 195 nucleotidesPFLU_RS02700 and PFLU_RS02705 are separated by 3 nucleotidesPFLU_RS02705 and PFLU_RS02710 are separated by 206 nucleotidesPFLU_RS02710 and PFLU_RS02715 are separated by 153 nucleotides PFLU_RS02695: PFLU_RS02695 - azurin, at 620,777 to 621,223 _RS02695 PFLU_RS02700: PFLU_RS02700 - ammonia-dependent NAD(+) synthetase, at 621,419 to 622,246 _RS02700 PFLU_RS02705: PFLU_RS02705 - nicotinate phosphoribosyltransferase, at 622,250 to 623,464 _RS02705 PFLU_RS02710: PFLU_RS02710 - LysR family transcriptional regulator, at 623,671 to 624,561 _RS02710 PFLU_RS02715: PFLU_RS02715 - aldehyde dehydrogenase family protein, at 624,715 to 626,205 _RS02715
Group Condition PFLU_RS02695 PFLU_RS02700 PFLU_RS02705 PFLU_RS02710 PFLU_RS02715
carbon source NAG (C) -0.8 -1.5 -0.3 -0.3 -0.1
carbon source L-Arabinose (C) +0.0 -2.7 -0.2 -0.0 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -2.6 -0.0 -0.0 -0.1
no stress control Glucose (C) and Betaine (N); with MOPS -0.0 -2.5 +0.0 -0.0 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.1 -1.9 -0.5 -0.0 -0.1
pH Growth at pH8 and (C) D-Glucose +0.0 -2.2 -0.3 -0.0 +0.1
carbon source L-Arabinose (C); with MOPS +0.0 -2.4 +0.3 -0.1 -0.3
no stress control Glucose (C) and Betaine (N); with TAPS -0.1 -2.0 -0.4 +0.2 +0.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 -2.4 -0.0 +0.1 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -1.8 +0.2 -0.1 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -1.8 -0.3 -0.3 +0.1
temperature shift Temperature shift 10_to_34; with MOPS -0.0 -2.5 +0.3 +0.1 +0.0
no stress control Glycine betaine (C)(N); with TAPS -0.4 -2.0 +0.2 +0.0 +0.2
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG -0.1 -2.2 -0.0 +0.1 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -1.1 -1.0 -0.1 -0.1
carbon source L-Isoleucine (C) -0.6 -1.5 +0.3 +0.0 -0.2
no stress control Glucose (C) and Ammonium chloride (N); with MOPS +0.2 -1.9 +0.2 -0.2 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 -1.8 +0.2 +0.6 +0.3
stress L-Glutamine (C)(N); with TAPS; with chloride +0.4 -1.9 +0.5 -0.1 -0.3
carbon source propionate 20 mM (C) +0.4 -2.0 +0.4 -0.1 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.0 +0.8 +0.6 -1.2 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.1 -1.1 +0.7 -0.2 -0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.2 -0.5 -1.3 +0.6 +0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 +0.8 +0.6 -1.2 -0.3
pH Growth at pH9 and (C) Trisodium citrate -0.1 +1.4 -0.7 +0.0 -0.3
carbon source 4-Aminobutyric (C) -0.4 +0.9 +0.7 -0.2 -0.5
carbon source Ferulic Acid (C) 1.5 mM -0.4 +1.8 -0.1 -0.5 -0.1
carbon source Ferulic Acid (C) 1.5 mM +0.1 +1.8 +0.1 -0.7 -0.3
carbon source acetate (C) -0.2 +1.0 +0.9 -0.3 -0.3
carbon source Inosine (C) +0.1 +2.9 +0.8 -0.1 -0.3
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