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Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25-INTG
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS02690 and PFLU_RS02695 are separated by 332 nucleotides
PFLU_RS02695 and PFLU_RS02700 are separated by 195 nucleotides
PFLU_RS02700 and PFLU_RS02705 are separated by 3 nucleotides
PFLU_RS02705 and PFLU_RS02710 are separated by 206 nucleotides
PFLU_RS02690: PFLU_RS02690 - hypothetical protein, at 620,256 to 620,444
_RS02690
PFLU_RS02695: PFLU_RS02695 - azurin, at 620,777 to 621,223
_RS02695
PFLU_RS02700: PFLU_RS02700 - ammonia-dependent NAD(+) synthetase, at 621,419 to 622,246
_RS02700
PFLU_RS02705: PFLU_RS02705 - nicotinate phosphoribosyltransferase, at 622,250 to 623,464
_RS02705
PFLU_RS02710: PFLU_RS02710 - LysR family transcriptional regulator, at 623,671 to 624,561
_RS02710
Group
Condition
PFLU
_RS02690
PFLU
_RS02695
PFLU
_RS02700
PFLU
_RS02705
PFLU
_RS02710
carbon source
L-Valine (C)
-4.8
+0.0
-0.9
+0.1
-0.0
carbon source
Phloretic Acid 2 mM (C)
-2.2
-0.8
-1.3
-0.2
+0.1
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-3.5
-1.0
+0.8
+0.6
-1.2
stress
Glucose (C) and Betaine (N); with TAPS; with chloride
-2.4
-0.2
-1.0
-0.2
-0.2
stress
Glucose (C) and Ammonium chloride (N); with MOPS; with chloride
-2.6
-0.1
-1.3
+0.2
+0.1
stress
Betaine (C)(N); with TAPS; with chloride
-1.7
-0.3
-1.6
+0.3
-0.3
carbon source
L-Valine 10 mM (C)
-2.4
+0.1
-0.9
-0.6
+0.2
carbon source
propionate 20 mM (C)
-2.4
+0.4
-2.0
+0.4
-0.1
stress
Betaine (C)(N); with MOPS; with chloride
-1.1
+0.1
-1.9
-0.5
-0.0
no stress control
Glucose (C) and nitrate (N); with TAPS
-2.4
-0.1
-0.8
-0.3
+0.1
no stress control
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-1.8
+0.5
-1.7
-0.1
+0.0
no stress control
p-Coumaric (C) and Ammonium chloride (N); with MOPS
-2.0
+0.2
-0.5
-1.3
+0.6
carbon source
L-Valine (C)
-3.1
+0.1
-0.3
+0.2
+0.1
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
-1.2
-0.7
-1.8
+0.2
+0.6
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
-1.5
+0.5
-1.2
-0.4
-0.1
stress
D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
-2.4
+0.0
-1.1
+0.2
+0.7
carbon source
4-hydroxyphenylacetic 2 mM (C)
-1.7
+0.5
-1.5
+0.2
-0.0
carbon source
L-Carnitine (C)
-2.4
+0.5
-0.8
+0.3
+0.1
carbon source
D-Mannitol (C)
-3.5
+0.0
+0.9
+0.3
-0.1
stress
Betaine (C)(N); with MOPS; with chloride
-2.0
-0.0
-0.8
+0.9
-0.4
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
-2.5
+0.1
+0.8
+0.6
-1.2
no stress control
L-Glutamine (C)(N); with TAPS
-2.4
-0.0
+0.9
-0.0
-0.2
carbon source
4-Aminobutyric (C)
-2.6
-0.4
+0.9
+0.7
-0.2
carbon source
acetate 30 mM (C)
-2.3
+0.1
+1.0
+0.5
-0.3
stress
L-Glutamine (C)(N); with TAPS; with chloride
+0.9
+0.4
-1.9
+0.5
-0.1
carbon source
propionate 20 mM (C)
+1.8
-0.2
-2.0
+0.1
+0.2
carbon source
Ferulic Acid (C) 1.5 mM
-1.0
+0.1
+1.8
+0.1
-0.7
stress
p-Coumaric (C) and Ammonium chloride (N); with TAPS
+1.5
+0.5
+0.6
+0.6
-0.5
carbon source
p-Coumaric 2 mM (C)
+2.1
+0.1
+0.5
+0.9
-0.5
carbon source
Inosine (C)
+0.3
+0.1
+2.9
+0.8
-0.1
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