Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS02385 and PFLU_RS02390 overlap by 8 nucleotidesPFLU_RS02390 and PFLU_RS02395 are separated by 774 nucleotidesPFLU_RS02395 and PFLU_RS02400 are separated by 41 nucleotidesPFLU_RS02400 and PFLU_RS02405 overlap by 4 nucleotides PFLU_RS02385: PFLU_RS02385 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 547,362 to 548,786 _RS02385 PFLU_RS02390: PFLU_RS02390 - NAD-dependent epimerase/dehydratase family protein, at 548,779 to 549,705 _RS02390 PFLU_RS02395: PFLU_RS02395 - hypothetical protein, at 550,480 to 551,439 _RS02395 PFLU_RS02400: PFLU_RS02400 - aldo/keto reductase, at 551,481 to 552,293 _RS02400 PFLU_RS02405: PFLU_RS02405 - FAD-dependent oxidoreductase, at 552,290 to 553,465 _RS02405
Group Condition PFLU_RS02385 PFLU_RS02390 PFLU_RS02395 PFLU_RS02400 PFLU_RS02405
carbon source L-Ornithine (C) N.D. N.D. -1.3 N.D. N.D.
carbon source L-Ornithine 10 mM (C) N.D. N.D. -1.3 N.D. N.D.
carbon source L-Ornithine (C) N.D. N.D. -1.1 N.D. N.D.
carbon source L-Ornithine (C) N.D. N.D. -1.0 N.D. N.D.
carbon source L-Ornithine 10 mM (C) N.D. N.D. -0.9 N.D. N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -0.9 N.D. N.D.
carbon source L-Ornithine 10 mM (C) N.D. N.D. -0.8 N.D. N.D.
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. N.D. -0.8 N.D. N.D.
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride N.D. N.D. -0.7 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs N.D. N.D. -0.6 N.D. N.D.
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride N.D. N.D. -0.6 N.D. N.D.
pH Growth at pH7 and (C) D-Glucose N.D. N.D. -0.6 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride N.D. N.D. -0.6 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs N.D. N.D. -0.6 N.D. N.D.
carbon source NAG (C) N.D. N.D. +0.6 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride N.D. N.D. +0.6 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.6 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.6 N.D. N.D.
carbon source p-Coumaric (C) 5 mM N.D. N.D. +0.7 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.7 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.7 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. N.D. +0.7 N.D. N.D.
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG N.D. N.D. +0.7 N.D. N.D.
carbon source p-Coumaric (C) 5 mM N.D. N.D. +0.8 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.8 N.D. N.D.
carbon source Citraconic 20 mM (C) N.D. N.D. +0.8 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.9 N.D. N.D.
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. N.D. +0.9 N.D. N.D.
carbon source Citraconic 20 mM (C) N.D. N.D. +1.0 N.D. N.D.
carbon source Citraconic 20 mM (C) N.D. N.D. +1.0 N.D. N.D.
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