Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01780 and PFLU_RS01785 are separated by 69 nucleotidesPFLU_RS01785 and PFLU_RS01790 are separated by 71 nucleotidesPFLU_RS01790 and PFLU_RS01795 overlap by 4 nucleotidesPFLU_RS01795 and PFLU_RS01800 are separated by 143 nucleotides PFLU_RS01780: PFLU_RS01780 - cytosine permease, at 399,581 to 401,026 _RS01780 PFLU_RS01785: PFLU_RS01785 - ABC transporter substrate-binding protein, at 401,096 to 402,061 _RS01785 PFLU_RS01790: PFLU_RS01790 - proline/glycine betaine ABC transporter permease, at 402,133 to 402,984 _RS01790 PFLU_RS01795: PFLU_RS01795 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 402,981 to 403,805 _RS01795 PFLU_RS01800: PFLU_RS01800 - histidine ammonia-lyase, at 403,949 to 405,457 _RS01800
Group Condition PFLU_RS01780 PFLU_RS01785 PFLU_RS01790 PFLU_RS01795 PFLU_RS01800
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.7 -1.9 -1.1 -1.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 -0.6 -1.4 -1.3 -0.8
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -0.6 -0.5 -1.5 -1.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -0.5 -1.3 -1.0 -1.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 -1.0 -0.8 -1.0 -0.7
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 -0.5 -0.4 -1.4 -0.9
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.6 -0.7 -0.0 -1.5 -0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -0.3 -1.6 -0.7 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.5 -0.5 -1.0 -1.2 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -0.3 -1.1 -0.8 -0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.5 -1.7 -0.5 -0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.9 +0.3 -0.9 -1.3
pH Growth at pH9 and (C) D-Glucose +0.2 -0.2 -0.7 -1.7 -0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.5 -0.5 -0.9 -0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -0.6 -0.7 -0.6 -0.4
stress Glucose (C) and Glycine betaine (N); with TAPS; with chloride -0.3 -0.5 -0.3 -1.1 -0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with PEG -0.3 -0.3 -0.5 -0.8 -0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 +0.1 +0.1 -0.7 -1.6
stress Glucose (C) and Glycine betaine (N); with TAPS; with chloride -0.5 -0.2 -0.4 -0.9 -0.4
stress L-Glutamine (C)(N); with MOPS; with chloride -0.3 -0.5 -0.6 -0.9 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.9 +0.7 -1.2 -0.3
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 -0.2 +0.9 -0.2 -0.3
carbon source Shikimic Acid (C) +0.3 -0.5 +0.6 -0.5 -0.3
carbon source Xanthosine (C) -0.2 -0.1 -1.1 +0.7 +0.4
no stress control Glycine betaine (C)(N); with TAPS +0.7 +0.1 +0.3 -0.9 +0.5
carbon source L-Valine 10 mM (C) +0.4 +0.5 +0.6 +1.3 +0.9
carbon source L-Valine 10 mM (C) +0.3 +0.7 +0.7 +1.4 +0.8
carbon source L-Valine 10 mM (C) +0.3 +0.8 +0.9 +1.6 +0.9
carbon source L-Valine (C) +0.7 +0.8 +1.1 +1.7 +1.3
carbon source L-Valine (C) +0.6 +1.0 +1.4 +2.2 +1.4
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