Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01555 and PFLU_RS01560 are separated by 173 nucleotidesPFLU_RS01560 and PFLU_RS01565 are separated by 87 nucleotidesPFLU_RS01565 and PFLU_RS01570 are separated by 89 nucleotidesPFLU_RS01570 and PFLU_RS01575 are separated by 149 nucleotides PFLU_RS01555: PFLU_RS01555 - alpha/beta fold hydrolase, at 349,699 to 350,652 _RS01555 PFLU_RS01560: PFLU_RS01560 - arsenic resistance protein, at 350,826 to 351,791 _RS01560 PFLU_RS01565: PFLU_RS01565 - membrane protein, at 351,879 to 353,471 _RS01565 PFLU_RS01570: PFLU_RS01570 - hypothetical protein, at 353,561 to 353,836 _RS01570 PFLU_RS01575: PFLU_RS01575 - hypothetical protein, at 353,986 to 354,543 _RS01575
Group Condition PFLU_RS01555 PFLU_RS01560 PFLU_RS01565 PFLU_RS01570 PFLU_RS01575
stress Betaine (C)(N); with TAPS; with chloride -0.3 -0.4 -0.5 N.D. -0.1
carbon source propionate 20 mM (C) -0.3 -0.6 -0.1 N.D. -0.2
carbon source Xanthosine (C) -0.4 -0.1 -0.6 N.D. -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.1 -0.5 -0.2 N.D. -0.3
pH Growth at pH8 and (C) Trisodium citrate -0.5 -0.4 +0.1 N.D. +0.0
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) -0.0 +0.2 -0.4 N.D. -0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -0.5 -0.0 N.D. +0.2
carbon source 4-Aminobutyric (C) -0.4 -0.5 +0.2 N.D. +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.3 +0.3 N.D. -0.8
carbon source Phloretic Acid 2 mM (C) -0.1 -0.5 -0.1 N.D. +0.3
carbon source 4-Guanidinobutyric (C) -0.7 +0.2 +0.2 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.5 +0.2 +0.1 N.D. +0.2
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride +0.3 -0.4 +0.2 N.D. +0.1
carbon source NAG (C) -0.4 +0.3 +0.3 N.D. +0.1
carbon source propionate 20 mM (C) +0.4 +0.1 -0.2 N.D. +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 -0.2 +0.1 N.D. -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 -0.2 +0.4 N.D. +0.1
carbon source Phloretic Acid 2 mM (C) +0.3 -0.2 +0.1 N.D. +0.4
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.3 -0.1 +0.5 N.D. -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.4 +0.2 +0.2 N.D. -0.3
pH Growth at pH7 and (C) D-Glucose +0.3 +0.3 -0.1 N.D. +0.3
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 +0.1 +0.6 N.D. +0.2
stress Betaine (C)(N); with MOPS; with chloride +0.6 -0.1 +0.2 N.D. +0.3
carbon source 4-hydroxyphenylacetic 2 mM (C) +0.2 +0.1 +0.4 N.D. +0.4
carbon source Choline chloride 10 mM (C) +0.2 +0.2 +0.2 N.D. +0.4
stress Betaine (C)(N); with MOPS; with chloride +0.1 +0.5 +0.3 N.D. +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.4 -0.0 +0.4 N.D. +0.4
carbon source p-Coumaric (C) 5 mM +0.2 +0.1 +0.4 N.D. +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.4 +0.1 +0.3 N.D. +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.5 +0.3 +1.0 N.D. +0.0
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