Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01515 and PFLU_RS01520 are separated by 241 nucleotidesPFLU_RS01520 and PFLU_RS01525 overlap by 20 nucleotidesPFLU_RS01525 and PFLU_RS01530 overlap by 1 nucleotidesPFLU_RS01530 and PFLU_RS01535 are separated by 74 nucleotides PFLU_RS01515: PFLU_RS01515 - cellulose synthase operon protein YhjQ, at 341,877 to 342,812 _RS01515 PFLU_RS01520: PFLU_RS01520 - methyltransferase, at 343,054 to 344,241 _RS01520 PFLU_RS01525: PFLU_RS01525 - ABC transporter permease, at 344,222 to 344,911 _RS01525 PFLU_RS01530: PFLU_RS01530 - ABC transporter permease, at 344,911 to 345,603 _RS01530 PFLU_RS01535: PFLU_RS01535 - ABC transporter substrate-binding protein, at 345,678 to 346,430 _RS01535
Group Condition PFLU_RS01515 PFLU_RS01520 PFLU_RS01525 PFLU_RS01530 PFLU_RS01535
carbon source L-Ornithine 10 mM (C) -0.4 -0.1 -2.5 -2.2 -2.4
carbon source L-Ornithine (C) +0.4 -0.0 -2.4 -2.1 -2.2
carbon source L-Ornithine (C) -0.7 -0.1 -1.7 -1.4 -1.5
carbon source L-Ornithine 10 mM (C) +0.3 +0.0 -2.0 -1.7 -1.8
carbon source L-Ornithine 10 mM (C) -0.2 -0.3 -1.3 -1.5 -1.7
carbon source L-Ornithine (C) +0.4 -0.2 -1.7 -1.5 -1.5
carbon source L-Leucine (C) 10 mM +0.2 -0.0 -1.2 -1.2 -0.9
carbon source L-Leucine (C) 10 mM +0.3 -0.1 -1.2 -1.0 -1.0
carbon source L-Leucine (C) 10 mM +0.1 -0.1 -1.2 -0.8 -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -0.2 -0.3 -1.3 -0.2
no stress control L-Glutamine (C)(N); with MOPS -1.0 +0.2 +0.3 -0.9 -0.2
no stress control Glucose (C) and L-Glutamine (N); with TAPS -1.9 +0.1 +0.2 +0.2 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.3 +0.1 +0.6 +0.1 +0.6
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.0 +0.3 +0.6 +0.5 +0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 +0.6 +0.5 +0.1 +0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 +0.0 +0.7 +0.4 +0.7
carbon source Phloretic Acid 2 mM (C) -0.6 +0.3 +0.4 +1.0 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.6 +0.3 +0.5 +0.6 +0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 +0.4 +0.4 +0.7 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.0 +0.4 +0.7 +0.7 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 +0.3 +0.7 +0.4 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.4 -0.0 +0.6 +1.0 +0.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.4 +0.7 +0.4 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.2 +0.6 +0.5 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 +0.4 +0.9 +0.3 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.4 +0.8 +0.6 +0.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 +0.2 +0.8 +0.9 +0.7
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -0.0 +0.7 +0.3 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +0.4 +1.0 +0.0 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.0 +0.4 +0.9 +0.3 +0.8
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