Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01460 and PFLU_RS01465 are separated by 181 nucleotidesPFLU_RS01465 and PFLU_RS01470 are separated by 805 nucleotidesPFLU_RS01470 and PFLU_RS01475 overlap by 4 nucleotidesPFLU_RS01475 and PFLU_RS01480 overlap by 4 nucleotides PFLU_RS01460: PFLU_RS01460 - tRNA-Thr, at 325,854 to 325,929 _RS01460 PFLU_RS01465: PFLU_RS01465 - hypothetical protein, at 326,111 to 326,518 _RS01465 PFLU_RS01470: PFLU_RS01470 - cellulose synthase operon protein YhjQ, at 327,324 to 328,289 _RS01470 PFLU_RS01475: PFLU_RS01475 - UDP-forming cellulose synthase catalytic subunit, at 328,286 to 330,505 _RS01475 PFLU_RS01480: PFLU_RS01480 - cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB, at 330,502 to 332,769 _RS01480
Group Condition PFLU_RS01460 PFLU_RS01465 PFLU_RS01470 PFLU_RS01475 PFLU_RS01480
carbon source 2-Keto-D-gluconic hemicalcium salt (C) N.D. +0.1 -0.9 -1.1 -1.2
carbon source 4-Guanidinobutyric (C) N.D. -0.4 +1.1 +1.0 +1.1
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. -0.1 +0.8 +1.3 +1.2
carbon source p-Coumaric (C) N.D. +0.0 +0.9 +1.1 +1.1
no stress control L-Glutamine (C)(N); with MOPS N.D. +0.1 +0.9 +1.1 +1.2
no stress control L-Glutamine (C)(N); with TAPS N.D. -0.1 +0.8 +1.3 +1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs N.D. +0.2 +0.7 +1.2 +1.3
no stress control L-Glutamine (C)(N); with MOPS N.D. -0.0 +0.9 +1.3 +1.3
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. -0.0 +1.0 +1.3 +1.3
no stress control L-Glutamine (C)(N); with TAPS N.D. +0.0 +1.0 +1.3 +1.3
no stress control L-Glutamine (C)(N); with TAPS N.D. +0.2 +0.8 +1.3 +1.2
stress Betaine (C)(N); with TAPS; with chloride N.D. -0.1 +1.2 +1.2 +1.3
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. +0.0 +0.9 +1.3 +1.4
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. +0.0 +0.8 +1.4 +1.4
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. -0.0 +1.1 +1.2 +1.3
no stress control L-Glutamine (C)(N); with TAPS N.D. -0.0 +1.0 +1.4 +1.3
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. +0.0 +1.1 +1.4 +1.5
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. +0.1 +0.9 +1.5 +1.5
no stress control Glucose (C) and L-Glutamine (N); with TAPS N.D. -0.0 +1.0 +1.5 +1.6
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS N.D. -0.1 +1.3 +1.3 +1.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. -0.1 +0.9 +1.7 +1.7
no stress control L-Glutamine (C)(N); with TAPS N.D. -0.0 +1.0 +1.7 +1.7
no stress control L-Glutamine (C)(N); with TAPS N.D. +0.0 +1.1 +1.7 +1.6
no stress control L-Glutamine (C)(N); with TAPS N.D. -0.0 +1.0 +1.8 +1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. +0.1 +1.1 +1.7 +1.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. +0.2 +1.1 +1.6 +1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. +0.1 +1.0 +1.7 +1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. +0.1 +1.1 +1.8 +1.8
no stress control L-Glutamine (C)(N); with TAPS N.D. +0.0 +1.3 +1.8 +1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs N.D. +0.2 +1.1 +1.9 +1.8
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