Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01425 and PFLU_RS01430 are separated by 151 nucleotidesPFLU_RS01430 and PFLU_RS01435 are separated by 121 nucleotidesPFLU_RS01435 and PFLU_RS01440 are separated by 233 nucleotidesPFLU_RS01440 and PFLU_RS01445 are separated by 64 nucleotides PFLU_RS01425: PFLU_RS01425 - dTDP-glucose 4,6-dehydratase, at 315,337 to 316,419 _RS01425 PFLU_RS01430: PFLU_RS01430 - aminotransferase, at 316,571 to 319,480 _RS01430 PFLU_RS01435: PFLU_RS01435 - agmatine deiminase, at 319,602 to 320,708 _RS01435 PFLU_RS01440: PFLU_RS01440 - hypothetical protein, at 320,942 to 321,157 _RS01440 PFLU_RS01445: PFLU_RS01445 - TonB-dependent siderophore receptor, at 321,222 to 323,309 _RS01445
Group Condition PFLU_RS01425 PFLU_RS01430 PFLU_RS01435 PFLU_RS01440 PFLU_RS01445
stress Betaine (C)(N); with TAPS; with chloride N.D. -0.2 -1.6 +0.1 -0.1
stress Betaine (C)(N); with MOPS; with chloride N.D. +0.1 -1.6 -0.2 -0.1
carbon source p-Coumaric 2 mM (C) N.D. +0.0 -1.0 -0.8 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -0.1 -0.8 -1.0 +0.1
carbon source propionate 20 mM (C) N.D. -0.1 -1.2 -0.4 -0.0
stress Betaine (C)(N); with TAPS; with chloride N.D. +0.0 -1.6 +0.1 -0.2
no stress control Glycine betaine (C)(N); with MOPS N.D. -0.1 -1.4 -0.2 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. -0.0 -0.3 -0.1 -1.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS N.D. +0.1 -0.4 -0.1 -1.1
carbon source 4-Aminobutyric (C) N.D. -0.1 -1.5 +0.1 -0.0
stress Betaine (C)(N); with MOPS; with chloride N.D. +0.2 -1.2 -0.3 +0.0
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS N.D. +0.0 -1.6 +0.3 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS N.D. -0.0 -1.6 +0.3 -0.0
stress Betaine (C)(N); with TAPS; with chloride N.D. +0.2 -1.5 -0.2 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. +0.1 -1.2 +0.2 -0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride N.D. +0.1 -1.2 +0.1 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. +0.4 -1.1 -0.3 +0.0
stress Betaine (C)(N); with MOPS; with chloride N.D. +0.2 -1.3 -0.0 +0.1
carbon source D-Mannitol (C) N.D. +0.2 -1.3 +0.1 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs N.D. +0.1 -1.2 +0.4 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. +0.4 -1.1 +0.4 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. +0.4 -1.0 +0.2 +0.3
carbon source L-Lysine (C) N.D. +0.1 +1.1 -0.5 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride N.D. +0.6 -0.4 +0.5 +0.2
carbon source L-Ornithine (C) N.D. -0.2 +3.2 +0.2 +0.2
carbon source L-Ornithine (C) N.D. -0.2 +3.6 +0.0 +0.1
carbon source L-Ornithine (C) N.D. -0.1 +3.5 +0.4 +0.0
carbon source L-Ornithine 10 mM (C) N.D. -0.1 +4.2 +0.2 +0.1
carbon source L-Ornithine 10 mM (C) N.D. -0.1 +4.4 +0.0 -0.0
carbon source L-Ornithine 10 mM (C) N.D. -0.1 +4.8 +0.3 +0.0
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