Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS01135 and PFLU_RS01140 are separated by 98 nucleotidesPFLU_RS01140 and PFLU_RS01145 are separated by 256 nucleotidesPFLU_RS01145 and PFLU_RS01150 overlap by 4 nucleotidesPFLU_RS01150 and PFLU_RS01155 overlap by 4 nucleotides PFLU_RS01135: PFLU_RS01135 - transporter substrate-binding domain-containing protein, at 248,689 to 249,543 _RS01135 PFLU_RS01140: PFLU_RS01140 - AAA family ATPase, at 249,642 to 250,802 _RS01140 PFLU_RS01145: PFLU_RS01145 - efflux RND transporter periplasmic adaptor subunit, at 251,059 to 252,141 _RS01145 PFLU_RS01150: PFLU_RS01150 - efflux RND transporter periplasmic adaptor subunit, at 252,138 to 253,208 _RS01150 PFLU_RS01155: PFLU_RS01155 - efflux RND transporter permease subunit, at 253,205 to 256,270 _RS01155
Group Condition PFLU_RS01135 PFLU_RS01140 PFLU_RS01145 PFLU_RS01150 PFLU_RS01155
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -0.2 -0.2 -1.1 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -0.2 -0.3 -1.5 +0.0
carbon source Phloretic Acid 2 mM (C) -0.3 +0.1 +0.1 -1.3 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 +0.1 -0.1 -1.5 +0.1
carbon source Choline chloride 10 mM (C) -0.4 -0.1 -0.1 -1.1 +0.0
carbon source p-Coumaric 2 mM (C) -0.2 +0.1 -1.2 -0.3 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.5 +0.0 -0.8 -0.3 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 +0.0 -0.6 -0.6 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.4 +0.1 -0.4 -0.6 -0.0
carbon source Betaine 10 mM (C) +0.1 +0.1 -0.3 -1.0 -0.1
carbon source Inosine (C) -0.7 -0.6 -0.7 +0.2 +0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.0 +0.2 +0.1 -1.1 -0.5
stress Betaine (C)(N); with MOPS; with chloride -0.5 +0.3 -0.0 -0.5 -0.2
carbon source L-Isoleucine (C) +0.3 +0.1 -0.5 -0.8 -0.1
carbon source NAG (C) +0.4 -0.4 +0.4 -1.3 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.3 -0.1 +0.5 -0.9 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.0 -0.9 +0.5 +0.1 -0.1
nitrogen source NAG (N); with MOPS -0.1 -0.5 +0.6 -0.4 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 -0.5 +0.7 -0.6 +0.1
stress Betaine (C)(N); with TAPS; with chloride +0.2 +0.2 +0.4 -0.8 -0.1
no stress control L-Glutamine (C)(N); with MOPS -0.1 -0.8 +0.1 +0.6 -0.0
stress Betaine (C)(N); with MOPS; with chloride -0.0 +0.5 -0.1 -0.7 +0.3
carbon source Xanthosine (C) +0.3 +0.3 +0.1 -0.8 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.2 +0.5 -0.9 +0.3
nitrogen source NAG (N); with MOPS +0.3 +0.5 +0.1 -0.7 +0.2
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.3 -0.6 +0.1 +0.7 -0.1
carbon source L-Valine (C) -0.3 +0.4 +0.1 +0.6 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.6 +0.4 -0.5 +0.5 +0.0
carbon source propionate 20 mM (C) -0.1 +0.8 +0.6 -0.0 +0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.3 +0.4 +0.6 -0.2 +0.4
remove
PFLU_RS01135
plot		 remove
PFLU_RS01140
plot		 remove
PFLU_RS01145		 remove
PFLU_RS01150
plot		 remove
PFLU_RS01155
plot