Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS01080 and PFLU_RS01085 are separated by 427 nucleotidesPFLU_RS01085 and PFLU_RS01090 overlap by 1 nucleotidesPFLU_RS01090 and PFLU_RS01095 overlap by 13 nucleotidesPFLU_RS01095 and PFLU_RS01100 are separated by 195 nucleotides PFLU_RS01080: PFLU_RS01080 - ABC transporter substrate-binding protein, at 240,892 to 241,674 _RS01080 PFLU_RS01085: PFLU_RS01085 - transposase, at 242,102 to 242,635 _RS01085 PFLU_RS01090: PFLU_RS01090 - type II toxin-antitoxin system RelE/ParE family toxin, at 242,635 to 242,928 _RS01090 PFLU_RS01095: PFLU_RS01095 - ribbon-helix-helix protein, CopG family, at 242,916 to 243,188 _RS01095 PFLU_RS01100: PFLU_RS01100 - recombinase family protein, at 243,384 to 243,950 _RS01100
Group Condition PFLU_RS01080 PFLU_RS01085 PFLU_RS01090 PFLU_RS01095 PFLU_RS01100
stress Sucrose (C) and Glycine betaine (N); with TAPS +0.1 -0.1 -0.0 -3.0 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 +0.0 -0.1 -2.9 -0.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.1 -0.3 -0.3 -2.2 -0.1
stress Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG -0.1 -0.0 -0.1 -2.6 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 -0.2 -0.4 -2.2 -0.1
stress Betaine (C)(N); with MOPS; with chloride -0.1 -0.3 -0.2 -1.7 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 +0.0 -0.7 -1.6 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 -0.4 -0.0 -2.0 -0.0
stress malate (C) and Ammonium chloride (N); with TAPS -0.0 -0.0 -0.1 -2.3 -0.1
stress L-Glutamine (C)(N); with TAPS; with chloride +0.2 +0.1 -0.2 -2.3 -0.3
stress Betaine (C)(N); with TAPS; with chloride -0.1 +0.1 +0.3 -2.6 -0.1
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride +0.0 +0.3 -0.0 -2.5 -0.2
stress Sucrose (C) and Ammonium chloride (N); with MOPS +0.0 -0.0 -0.1 -2.4 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -0.3 +0.4 -2.4 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.1 -0.2 -2.4 +0.1
stress Sucrose (C) and Ammonium chloride (N); with MOPS +0.1 -0.1 +0.0 -2.2 +0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.4 -0.4 -0.2 -2.3 +0.5
stress Glucose (C) and Glycine betaine (N); with MOPS; with chloride +0.0 +0.3 +0.2 -2.4 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 +0.4 +0.1 -1.8 -0.4
stress Betaine (C)(N); with MOPS; with chloride +0.2 +0.1 +0.1 -2.2 -0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 -0.1 -0.3 -2.0 +0.2
carbon source D-Glucuronic (C) +0.2 +0.1 +0.3 -1.9 -0.4
stress Betaine (C)(N); with MOPS; with chloride +0.6 -0.2 +0.1 -2.1 -0.1
stress L-Glutamine (C)(N); with TAPS; with chloride +0.1 +0.2 +0.2 -2.1 +0.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.2 +0.0 -2.3 +0.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.0 -0.2 -1.0 -0.6 +0.7
carbon source Inosine (C) +0.1 -0.0 +0.5 -1.9 +0.2
carbon source Phloretic Acid 2 mM (C) +0.2 -0.2 +0.2 -1.8 +0.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.1 +0.7 -2.0 +0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.0 +0.6 -2.0 +0.6
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