Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS00815 and PFLU_RS00820 are separated by 39 nucleotidesPFLU_RS00820 and PFLU_RS00825 are separated by 29 nucleotidesPFLU_RS00825 and PFLU_RS00830 overlap by 4 nucleotidesPFLU_RS00830 and PFLU_RS00835 are separated by 121 nucleotides PFLU_RS00815: PFLU_RS00815 - hypothetical protein, at 181,805 to 182,386 _RS00815 PFLU_RS00820: PFLU_RS00820 - curli production assembly protein CsgG, at 182,426 to 183,106 _RS00820 PFLU_RS00825: PFLU_RS00825 - DUF4810 domain-containing protein, at 183,136 to 183,498 _RS00825 PFLU_RS00830: PFLU_RS00830 - DUF799 domain-containing protein, at 183,495 to 184,145 _RS00830 PFLU_RS00835: PFLU_RS00835 - VWA domain-containing protein, at 184,267 to 185,889 _RS00835
Group Condition PFLU_RS00815 PFLU_RS00820 PFLU_RS00825 PFLU_RS00830 PFLU_RS00835
no stress control Glycine betaine (C)(N); with TAPS -0.3 -0.2 -0.6 +0.0 -0.2
pH Growth at pH9 and (C) Trisodium citrate +0.1 -0.2 -1.2 +0.1 +0.0
carbon source Phloretic Acid 2 mM (C) -0.2 -0.0 -0.6 -0.3 -0.1
stress Betaine (C)(N); with TAPS; with chloride -0.4 +0.1 -0.6 -0.1 +0.1
carbon source Xanthosine (C) -0.3 +0.1 -0.6 -0.2 -0.0
stress Betaine (C)(N); with MOPS; with chloride +0.1 +0.1 -1.0 -0.2 +0.3
carbon source L-Arabinose (C) +0.0 +0.2 -1.0 +0.0 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 +0.1 -1.2 +0.2 +0.2
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.2 -0.3 +0.6 -0.3 -0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.1 -0.8 +0.1 +0.3 +0.0
pH Growth at pH7 and (C) D-Glucose -0.2 +0.3 -0.3 -0.2 -0.1
carbon source Shikimic Acid (C) -0.1 -0.1 -0.6 -0.1 +0.4
carbon source p-Coumaric (C) 5 mM +0.2 +0.2 -1.0 +0.1 +0.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -0.0 -1.0 +0.1 +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.2 +0.1 -0.6 -0.1 +0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 -0.5 -0.2 +0.2 +0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 +0.3 +0.5 -0.3 -0.6
pH Growth at pH7 and (C) D-Glucose +0.3 +0.2 +0.3 -0.3 -0.2
stress Betaine (C)(N); with TAPS; with chloride +0.2 +0.2 -0.4 +0.3 +0.1
carbon source p-Coumaric 2 mM (C) +0.1 -0.2 +0.4 -0.2 +0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 +0.3 -0.3 -0.1 +0.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 +0.0 +0.6 +0.3 -0.2
temperature shift Temperature shift 30_to_25; with MOPS -0.3 -0.0 +0.7 +0.2 -0.0
carbon source D,L-Malic Acid (C) +0.0 -0.3 +0.6 +0.2 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.3 +0.3 +0.4 -0.4 +0.2
carbon source Phloretic Acid 2 mM (C) -0.2 +0.2 +0.6 +0.0 +0.1
carbon source NAG (C) +0.4 +0.1 +0.7 +0.0 -0.3
stress Betaine (C)(N); with MOPS; with chloride +0.7 +0.3 +0.2 -0.1 -0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.1 +0.1 +0.7 +0.1 +0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.5 -0.0 +0.7 +0.2 +0.1
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